GSMUA_Achr4G11430_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr4G11430_001 T002374_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF3
M01607_2.00 		Arabidopsis thaliana
CGCCGSCR
YGSCGGCG		 PBM
Weirauch et al.(2014)
pTH8109 		0.721 0.894
ERF3
M06584_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
ERF3_col_a 		0.721 0.894
ERF3
M06585_2.00 		Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR
YGRCGGCGGHRNNDNHDDNN		 Dap-seq
OMalley et al.(2016)
ERF3_colamp_a 		0.721 0.894
ERF7
M01617_2.00 		Arabidopsis thaliana
NGCCGNMNNN
NNNKNCGGCN		 PBM
Weirauch et al.(2014)
pTH7606 		0.700 0.787
ERF7
M06620_2.00 		Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD
HGRCGGCGGHGRHRRNRDNDR		 Dap-seq
OMalley et al.(2016)
ERF7_col_a 		0.700 0.787
ERF7
M06621_2.00 		Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH
DYGGCGGCGSHDDNDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF7_colamp_a 		0.700 0.787
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.696 0.702
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.696 0.702
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.696 0.702
OS05G0497200
M01636_2.00 		Oryza sativa
CGSCGCCR
YGGCGSCG		 PBM
Weirauch et al.(2014)
pTH8640 		0.685 0.723
ERF095
M06624_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ESE1_col_a 		0.681 0.681
ERF095
M06625_2.00 		Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR		 Dap-seq
OMalley et al.(2016)
ESE1_colamp_a 		0.681 0.681
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P11430_001 AP2 18 69

Links

Other AP2 family TFs
Other Musa acuminata TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr1G18230_001 Musa acuminata GSMUA_Achr1G18230_001 I 0.802
GSMUA_Achr4G06170_001 Musa acuminata GSMUA_Achr4G06170_001 I 0.797
GSMUA_Achr4G04060_001 Musa acuminata GSMUA_Achr4G04060_001 I 0.796
Cla005423 Citrullus lanatus Cla005423 I 0.779
PRUPE_ppa010804mg Prunus persica PRUPE_ppa010804mg I 0.772
VIT_12s0059g01460 Vitis vinifera VIT_12s0059g01460 I 0.772
mgf016282m Mimulus guttatus mgf016282m I 0.772
Pm014953 Prunus mume Pm014953 I 0.772
MDP0000839828 Malus domestica MDP0000839828 I 0.772
gene01152-v1.0-hybrid Fragaria vesca gene01152-v1.0-hybrid I 0.772
mgf007166m Mimulus guttatus mgf007166m I 0.771
orange1.1g027990m.g Citrus sinensis orange1.1g027990m.g I 0.771
evm.TU.supercontig_12.251 Carica papaya evm.TU.supercontig_12.251 I 0.771
Cucsa.042770 Cucumis sativus Cucsa.042770 I 0.771
Ciclev10016668m.g Citrus clementina Ciclev10016668m.g I 0.771
Solyc07g064890.1 Solanum lycopersicum Solyc07g064890.1 I 0.769
chr2.LjT24P12.30.nd Lotus japonicus chr2.LjT24P12.30.nd I 0.769
PK25211.1 Cannabis sativa PK25211.1 I 0.769
orange1.1g045783m.g Citrus sinensis orange1.1g045783m.g I 0.769
Ciclev10009361m.g Citrus clementina Ciclev10009361m.g I 0.769
MDP0000629527 Malus domestica MDP0000629527 I 0.767
PRUPE_ppa010893mg Prunus persica PRUPE_ppa010893mg I 0.767
MDP0000542633 Malus domestica MDP0000542633 I 0.767
Pm011907 Prunus mume Pm011907 I 0.767
Cucsa.190200 Cucumis sativus Cucsa.190200 I 0.766
Cla003319 Citrullus lanatus Cla003319 I 0.766
Solyc10g006130.1 Solanum lycopersicum Solyc10g006130.1 I 0.765
Eucgr.A01091 Eucalyptus grandis Eucgr.A01091 I 0.763
Aquca_027_00311 Aquilegia coerulea Aquca_027_00311 I 0.762
POPTR_0001s36610 Populus trichocarpa POPTR_0001s36610 I 0.761
PGSC0003DMG400022305 Solanum tuberosum PGSC0003DMG400022305 I 0.761
29640.m000403 Ricinus communis 29640.m000403 I 0.760
Bo6g022410 Brassica oleracea Bo6g022410 I 0.760
evm.TU.supercontig_132.31 Carica papaya evm.TU.supercontig_132.31 I 0.759
Lus10031526.g Linum usitatissimum Lus10031526.g I 0.759
PGSC0003DMG400014417 Solanum tuberosum PGSC0003DMG400014417 I 0.757
SapurV1A.0126s0320 Salix purpurea SapurV1A.0126s0320 I 0.754
SapurV1A.0126s0330 Salix purpurea SapurV1A.0126s0330 I 0.754
cassava43266.valid.m1 Manihot esculenta cassava43266.valid.m1 I 0.750
GSMUA_Achr3G13010_001 Musa acuminata GSMUA_Achr3G13010_001 I 0.749
GLYMA02G43500 Glycine max GLYMA02G43500 I 0.748
GLYMA14G05470 Glycine max GLYMA14G05470 I 0.748
MDP0000744693 Malus domestica MDP0000744693 I 0.745
MDP0000243113 Malus domestica MDP0000243113 I 0.745
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.742
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.742
Lus10035329.g Linum usitatissimum Lus10035329.g I 0.741
Lus10029987.g Linum usitatissimum Lus10029987.g I 0.741
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.734
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.734
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.734
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.734
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.734
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.732
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.732
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.732
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.732
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.731
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.731
Gorai.002G092900 Gossypium raimondii Gorai.002G092900 I 0.724
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I 0.724
VIT_19s0090g01080 Vitis vinifera VIT_19s0090g01080 I 0.724
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.723
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.723
ERF3 Arabidopsis thaliana AT1G50640 D 0.721
BRADI2G21067 Brachypodium distachyon BRADI2G21067 I 0.721
Gorai.009G443400 Gossypium raimondii Gorai.009G443400 I 0.720
TCM_030804 Theobroma cacao TCM_030804 I 0.719
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.716
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I 0.715
Carubv10010284m.g Capsella rubella Carubv10010284m.g I 0.715
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.712
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.712
cassava6588.valid.m1 Manihot esculenta cassava6588.valid.m1 I 0.710
Bra018864 Brassica rapa Bra018864 I 0.710
Ca_17824 Cicer arietinum Ca_17824 I 0.710
Bostr.26675s0113 Boechera stricta Bostr.26675s0113 I 0.709
ERF3 Arabidopsis lyrata fgenesh2_kg.1__4150__AT1G50640.1 I 0.709
MTR_5g085100 Medicago truncatula MTR_5g085100 I 0.708
fgenesh2_kg.3__2537__AT3G23220.1 Arabidopsis lyrata fgenesh2_kg.3__2537__AT3G23220.1 I 0.708
MDP0000457509 Malus domestica MDP0000457509 I 0.706
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.705
Cla013723 Citrullus lanatus Cla013723 I 0.705
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.704
Cucsa.139820 Cucumis sativus Cucsa.139820 I 0.703
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.702
cassava34729.m1 Manihot esculenta cassava34729.m1 I 0.701
Lus10043182.g Linum usitatissimum Lus10043182.g I 0.701
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.700
ERF7 Arabidopsis thaliana AT3G20310 D 0.700
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.699
GLYMA03G31640 Glycine max GLYMA03G31640 I 0.698
MDP0000236605 Malus domestica MDP0000236605 I 0.696
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.696
MDP0000310904 Malus domestica MDP0000310904 I 0.696
Bra004873 Brassica rapa Bra004873 I 0.696
Bo4g024140 Brassica oleracea Bo4g024140 I 0.696
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.696
ERF13 Arabidopsis thaliana AT2G44840 D 0.696
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.696
Bo4g195220 Brassica oleracea Bo4g195220 I 0.696
Bra037630 Brassica rapa Bra037630 I 0.696
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.696
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I 0.695
Gorai.004G032500 Gossypium raimondii Gorai.004G032500 I 0.695
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.695
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.694
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I 0.693
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I 0.693
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I 0.693
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I 0.692
30174.m008759 Ricinus communis 30174.m008759 I 0.692
PK23186.1 Cannabis sativa PK23186.1 I 0.691
Traes_5BL_FBC7AF288 Triticum aestivum Traes_5BL_FBC7AF288 I 0.691
Thhalv10022200m.g Eutrema salsugineum Thhalv10022200m.g I 0.690
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I 0.690
GSMUA_Achr5G09940_001 Musa acuminata GSMUA_Achr5G09940_001 I 0.690
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.690
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.689
ORGLA08G0225800 Oryza glaberrima ORGLA08G0225800 I 0.689
Lus10016212.g Linum usitatissimum Lus10016212.g I 0.689
BGIOSGA029071 Oryza indica BGIOSGA029071 I 0.689
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.689
OMERI08G16840 Oryza meridionalis OMERI08G16840 I 0.689
VIT_07s0141g00690 Vitis vinifera VIT_07s0141g00690 I 0.688
VIT_14s0081g00520 Vitis vinifera VIT_14s0081g00520 I 0.688
cassava19883.m1 Manihot esculenta cassava19883.m1 I 0.688
GRMZM2G103085 Zea mays GRMZM2G103085 I 0.688
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I 0.688
PK02998.1 Cannabis sativa PK02998.1 I 0.688
30174.m008755 Ricinus communis 30174.m008755 I 0.688
SELMODRAFT_73142 Selaginella moellendorffii SELMODRAFT_73142 I 0.687
SapurV1A.0007s0970 Salix purpurea SapurV1A.0007s0970 I 0.687
Gorai.013G169500 Gossypium raimondii Gorai.013G169500 I 0.687
Bo7g040810 Brassica oleracea Bo7g040810 I 0.687
gene21403-v1.0-hybrid Fragaria vesca gene21403-v1.0-hybrid I 0.687
SELMODRAFT_49950 Selaginella moellendorffii SELMODRAFT_49950 I 0.687
TCM_005706 Theobroma cacao TCM_005706 I 0.687
Bra014925 Brassica rapa Bra014925 I 0.687
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.686
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.686
Sb08g004260 Sorghum bicolor Sb08g004260 I 0.686
SELMODRAFT_443461 Selaginella moellendorffii SELMODRAFT_443461 I 0.686
MLOC_10878 Hordeum vulgare MLOC_10878 I 0.686
SELMODRAFT_430375 Selaginella moellendorffii SELMODRAFT_430375 I 0.686
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.686
Sb07g025843 Sorghum bicolor Sb07g025843 I 0.686
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.686
Pm017696 Prunus mume Pm017696 I 0.686
OPUNC02G31100 Oryza punctata OPUNC02G31100 I 0.686
30174.m008756 Ricinus communis 30174.m008756 I 0.686
GRMZM2G020016 Zea mays GRMZM2G020016 I 0.686
ORGLA05G0187500 Oryza glaberrima ORGLA05G0187500 I 0.685
OMERI05G19480 Oryza meridionalis OMERI05G19480 I 0.685
ONIVA05G22260 Oryza nivara ONIVA05G22260 I 0.685
OPUNC05G19220 Oryza punctata OPUNC05G19220 I 0.685
OGLUM05G22780 Oryza glumaepatula OGLUM05G22780 I 0.685
chr1.CM0375.170.nd Lotus japonicus chr1.CM0375.170.nd I 0.685
BGIOSGA017797 Oryza indica BGIOSGA017797 I 0.685
LPERR05G17470 Leersia perrieri LPERR05G17470 I 0.685
ORUFI05G22840 Oryza rufipogon ORUFI05G22840 I 0.685
Gorai.001G252400 Gossypium raimondii Gorai.001G252400 I 0.685
Thhalv10022108m.g Eutrema salsugineum Thhalv10022108m.g I 0.685
OS05G0497200 Oryza sativa OS05G0497200 D 0.685
Pavir.J28880 Panicum virgatum Pavir.J28880 I 0.684
LPERR02G27530 Leersia perrieri LPERR02G27530 I 0.684
evm.TU.supercontig_101.15 Carica papaya evm.TU.supercontig_101.15 I 0.683
Bra023748 Brassica rapa Bra023748 I 0.683
Bra014924 Brassica rapa Bra014924 I 0.683
AMTR_s00040p00180260 Amborella trichopoda AMTR_s00040p00180260 I 0.683
Bo1g102220 Brassica oleracea Bo1g102220 I 0.683
Bo7g040820 Brassica oleracea Bo7g040820 I 0.683
Ca_12205 Cicer arietinum Ca_12205 I 0.683
Pm017699 Prunus mume Pm017699 I 0.683
cassava19881.m1 Manihot esculenta cassava19881.m1 I 0.682
SELMODRAFT_28277 Selaginella moellendorffii SELMODRAFT_28277 I 0.682
POPTR_0014s04600 Populus trichocarpa POPTR_0014s04600 I 0.682
SELMODRAFT_131245 Selaginella moellendorffii SELMODRAFT_131245 I 0.682
POPTR_0002s04430 Populus trichocarpa POPTR_0002s04430 I 0.681
cassava19882.m1 Manihot esculenta cassava19882.m1 I 0.681
ERF095 Arabidopsis thaliana AT3G23220 D 0.681
e_gw1.487.2.1 Physcomitrella patens e_gw1.487.2.1 I 0.681
Eucgr.G00396 Eucalyptus grandis Eucgr.G00396 I 0.681
Eucgr.G00394 Eucalyptus grandis Eucgr.G00394 I 0.681
GSMUA_Achr6G01440_001 Musa acuminata GSMUA_Achr6G01440_001 I 0.681
Pm020210 Prunus mume Pm020210 I 0.681
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.681
Pavir.Da00220 Panicum virgatum Pavir.Da00220 I 0.681
PRUPE_ppa022435mg Prunus persica PRUPE_ppa022435mg I 0.681
TCM_005707 Theobroma cacao TCM_005707 I 0.680
SELMODRAFT_129122 Selaginella moellendorffii SELMODRAFT_129122 I 0.680
SELMODRAFT_17648 Selaginella moellendorffii SELMODRAFT_17648 I 0.680
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I 0.680
POPTR_0014s04610 Populus trichocarpa POPTR_0014s04610 I 0.680
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I 0.679
POPTR_0005s24110 Populus trichocarpa POPTR_0005s24110 I 0.679
Pavir.J03216 Panicum virgatum Pavir.J03216 I 0.679
VIT_05s0049g00500 Vitis vinifera VIT_05s0049g00500 I 0.679
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.679
Eucgr.G00392 Eucalyptus grandis Eucgr.G00392 I 0.679
Eucgr.G00393 Eucalyptus grandis Eucgr.G00393 I 0.679
Bra001784 Brassica rapa Bra001784 I 0.678
Bo3g074840 Brassica oleracea Bo3g074840 I 0.678
OBART12G04120 Oryza barthii OBART12G04120 I 0.677
OGLUM02G34120 Oryza glumaepatula OGLUM02G34120 I 0.677
OBART02G33690 Oryza barthii OBART02G33690 I 0.677
OGLUM12G04880 Oryza glumaepatula OGLUM12G04880 I 0.677
BGIOSGA036561 Oryza indica BGIOSGA036561 I 0.677
BGIOSGA005557 Oryza indica BGIOSGA005557 I 0.677
ORUFI12G04720 Oryza rufipogon ORUFI12G04720 I 0.677
Pavir.J32690 Panicum virgatum Pavir.J32690 I 0.677
Cucsa.129330 Cucumis sativus Cucsa.129330 I 0.677
ORGLA02G0291300 Oryza glaberrima ORGLA02G0291300 I 0.677
OPUNC12G04190 Oryza punctata OPUNC12G04190 I 0.677
ONIVA02G33420 Oryza nivara ONIVA02G33420 I 0.677
ONIVA12G03810 Oryza nivara ONIVA12G03810 I 0.677
OMERI02G32080 Oryza meridionalis OMERI02G32080 I 0.677