GSMUA_Achr5G28050_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr5G28050_001 T002411_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.741 0.898
Q8H769_WHEAT
M09721_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.729 0.898
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P28050_001 AP2 12 63

Links

Other AP2 family TFs
Other Musa acuminata TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_05774 Aegilops tauschii F775_05774 I 0.729
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.710
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.701
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.680
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.707
Bo9g177130 Brassica oleracea Bo9g177130 I 0.695
Bo3g013160 Brassica oleracea Bo3g013160 I 0.691
Bra006460 Brassica rapa Bra006460 I 0.691
PK07402.1 Cannabis sativa PK07402.1 D 0.741
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.727
Cla012194 Citrullus lanatus Cla012194 I 0.706
Cla006713 Citrullus lanatus Cla006713 I 0.724
Cla001755 Citrullus lanatus Cla001755 I 0.683
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.720
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.720
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.683
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.725
Cucsa.130200 Cucumis sativus Cucsa.130200 I 0.695
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.693
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.705
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.706
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.706
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.701
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.679
GLYMA12G32400 Glycine max GLYMA12G32400 I 0.703
GLYMA13G38030 Glycine max GLYMA13G38030 I 0.703
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.715
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.694
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.685
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.729
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.708
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.716
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.716
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.713
MDP0000446783 Malus domestica MDP0000446783 I 0.705
MDP0000880312 Malus domestica MDP0000880312 I 0.679
MDP0000165880 Malus domestica MDP0000165880 I 0.705
MDP0000290585 Malus domestica MDP0000290585 I 0.700
MDP0000147009 Malus domestica MDP0000147009 I 0.705
MDP0000153866 Malus domestica MDP0000153866 I 0.682
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.722
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.716
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.710
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.753
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.791
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.741
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.768
OBART01G04210 Oryza barthii OBART01G04210 I 0.700
OB01G13930 Oryza brachyantha OB01G13930 I 0.700
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.700
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.700
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.700
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.700
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.700
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.700
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.700
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.700
DREB2A Oryza sativa OS01G0165000 I 0.700
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.700
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.679
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.679
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.697
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.728
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.721
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.721
Pm003634 Prunus mume Pm003634 I 0.678
Pm015262 Prunus mume Pm015262 I 0.701
Pm018989 Prunus mume Pm018989 I 0.699
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.699
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.701
29729.m002292 Ricinus communis 29729.m002292 I 0.710
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.715
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.719
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.715
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.719
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.686
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.686
Si002067m.g Setaria italica Si002067m.g I 0.693
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.679
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.713
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.713
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.679
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.690
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.679
TCM_043306 Theobroma cacao TCM_043306 I 0.679
TCM_043302 Theobroma cacao TCM_043302 I 0.679
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.705
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.729
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.729
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.729
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.729
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.731