GSMUA_Achr6G02310_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr6G02310_001 T002416_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-6
M00717_2.00
Arabidopsis thaliana
NBGCYGNH

DNCRGCVN
PBM
Chang et al.(2013)
pTH7225
0.778 0.800
RAP2-6
M00841_2.00
Arabidopsis thaliana
NGCCGHHNNN

NNNDDCGGCN
PBM
Franco-Zorrilla et al.(2014)
RAP2.6
0.778 0.800
RAP2-6
M06579_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYMD

HKRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
RAP26_col_a
0.778 0.800
RAP2-6
M06580_2.00
Arabidopsis thaliana
CGCCGY

RCGGCG
Dap-seq
OMalley et al.(2016)
RAP26_colamp_a
0.778 0.800
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.767 0.920
ERF115
M06657_2.00
Arabidopsis thaliana
CCGCCGYMRYHDCCR

YGGHDRYKRCGGCGG
Dap-seq
OMalley et al.(2016)
ERF115_col_a
0.753 0.740
ERF115
M06658_2.00
Arabidopsis thaliana
CKCCGCCGYMRYHDY

RHDRYKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ERF115_colamp_a
0.753 0.740
A4F248_TOBAC
M09725_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF1_01
0.719 0.840
A4F249_TOBAC
M09726_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF2_01
0.719 0.840
AT2G33710
M01613_2.00
Arabidopsis thaliana
NSMGCCGHMN

NKDCGGCKSN
PBM
Weirauch et al.(2014)
pTH7543
0.715 0.780
AT2G33710
M06606_2.00
Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH

DNHDDHDRCGGCGGCGVH
Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a
0.715 0.780
AT2G33710
M06607_2.00
Arabidopsis thaliana
NHDYCKCCGCCGYMD

HKRCGGCGGMGRHDN
Dap-seq
OMalley et al.(2016)
At2g33710_col
0.715 0.780
ERF113
M01629_2.00
Arabidopsis thaliana
NNGCCGHHNN

NNDDCGGCNN
PBM
Weirauch et al.(2014)
pTH8097
0.700 0.720
ABR1
M01051_2.00
Arabidopsis thaliana
NYGSCGSCVNN

NNBGSCGSCRN
PBM
Sullivan et al.(2014)
pTH7383
0.680 0.760
ABR1
M06684_2.00
Arabidopsis thaliana
CKCCGCCGYMDHHNYHNHH

DDNDRNDDHKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ABR1_col_a
0.680 0.760
ABR1
M06685_2.00
Arabidopsis thaliana
HNNHDSCGCCGCMAWHNNNNN

NNNNNDWTKGCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
ABR1_colamp_a
0.680 0.760
O65242_TOBAC
M09730_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TSI1_01
0.679 0.680
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD

HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.678 0.680
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P02310_001 AP2 81 132

Links

Other AP2 family TFs
Other Musa acuminata TFs

671 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_034400 Acremonium chrysogenum ACRE_034400 N 0.000
BBA_10208 Beauveria bassiana BBA_10208 N 0.000
CPUR_08694 Claviceps purpurea CPUR_08694 I 0.000
CFIO01_04039 Colletotrichum fioriniae CFIO01_04039 N 0.000
Cob_07971 Colletotrichum orbiculare Cob_07971 N 0.000
fgenesh1_pg.C_scaffold_10000074 Cryphonectria parasitica fgenesh1_pg.C_scaffold_10000074 I 0.000
CMQ_1415 Grosmannia clavigera CMQ_1415 N 0.000
MBM_07425 Marssonina brunnea MBM_07425 N 0.000
MAC_01687 Metarhizium acridum MAC_01687 I 0.000
MAM_00136 Metarhizium album MAM_00136 N 0.000
MBR_02856 Metarhizium brunneum MBR_02856 N 0.000
MGU_00155 Metarhizium guizhouense MGU_00155 N 0.000
MAJ_02341 Metarhizium majus MAJ_02341 N 0.000
X797_000915 Metarhizium robertsii X797_000915 N 0.000
MYCTH_2308522 Myceliophthora thermophila MYCTH_2308522 I 0.000
OCS_03846 Ophiocordyceps sinensis OCS_03846 N 0.000
SERLA73DRAFT_131740 Serpula lacrymans SERLA73DRAFT_131740 I 0.000
THITE_22048 Thielavia terrestris THITE_22048 I 0.000
VHEMI02919 Torrubiella hemipterigena VHEMI02919 N 0.000
TRIATDRAFT_37227 Trichoderma atroviride TRIATDRAFT_37227 N 0.000
TRIVIDRAFT_16124 Trichoderma virens TRIVIDRAFT_16124 N 0.000
UV8b_7580 Ustilaginoidea virens UV8b_7580 N 0.000