GSMUA_Achr6G26280_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr6G26280_001 T002429_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q8LKX0_MAIZE
M09722_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DBF2_01
0.720 0.820
AT3G16280
M06618_2.00
Arabidopsis thaliana
NDNCACCGACANHN

NDNTGTCGGTGNHN
Dap-seq
OMalley et al.(2016)
AT3G16280_col_a
0.702 0.820
AT3G16280
M06619_2.00
Arabidopsis thaliana
BCACCGACAHWNNN

NNNWDTGTCGGTGV
Dap-seq
OMalley et al.(2016)
AT3G16280_colamp_a
0.702 0.820
ERF043
M01627_2.00
Arabidopsis thaliana
YRCCGACA

TGTCGGYR
PBM
Weirauch et al.(2014)
pTH7413
0.685 0.800
ERF043
M06651_2.00
Arabidopsis thaliana
NNYCACCGACANHNNN

NNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a
0.685 0.800
ERF043
M06652_2.00
Arabidopsis thaliana
NNYCACCGACANHNNH

DNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_col
0.685 0.800
ERF034
M06614_2.00
Arabidopsis thaliana
NHNYCACCGACANHD

HDNTGTCGGTGRNDN
Dap-seq
OMalley et al.(2016)
At2g44940_col_a
0.680 0.800
ERF034
M06615_2.00
Arabidopsis thaliana
NDBCACCGACANH

DNTGTCGGTGVHN
Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a
0.680 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P26280_001 AP2 59 110

Links

Other AP2 family TFs
Other Musa acuminata TFs

244 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GSMUA_Achr9G05860_001 Musa acuminata GSMUA_Achr9G05860_001 I 0.781
GSMUA_Achr2G09430_001 Musa acuminata GSMUA_Achr2G09430_001 I 0.751
mgf022802m Mimulus guttatus mgf022802m I 0.746
GLYMA08G03910 Glycine max GLYMA08G03910 I 0.744
MTR_8g102800 Medicago truncatula MTR_8g102800 I 0.744
Ca_05941 Cicer arietinum Ca_05941 I 0.744
GLYMA05G35741 Glycine max GLYMA05G35741 I 0.741
chr4.CM0617.510.nd Lotus japonicus chr4.CM0617.510.nd I 0.741
Eucgr.C03785 Eucalyptus grandis Eucgr.C03785 I 0.740
MTR_2g101340 Medicago truncatula MTR_2g101340 I 0.738
mgf019024m Mimulus guttatus mgf019024m I 0.737
Cla004187 Citrullus lanatus Cla004187 I 0.737
evm.TU.supercontig_109.32 Carica papaya evm.TU.supercontig_109.32 I 0.737
GRMZM5G816314 Zea mays GRMZM5G816314 I 0.736
Si017865m.g Setaria italica Si017865m.g I 0.736
Gorai.004G281600 Gossypium raimondii Gorai.004G281600 I 0.736
Sb04g032940 Sorghum bicolor Sb04g032940 I 0.736
GRMZM2G072926 Zea mays GRMZM2G072926 I 0.736
Cucsa.235510 Cucumis sativus Cucsa.235510 I 0.734
Ciclev10009138m.g Citrus clementina Ciclev10009138m.g I 0.734
orange1.1g041119m.g Citrus sinensis orange1.1g041119m.g I 0.734
gene11882-v1.0-hybrid Fragaria vesca gene11882-v1.0-hybrid I 0.731
Gorai.001G008100 Gossypium raimondii Gorai.001G008100 I 0.731
Gorai.010G075300 Gossypium raimondii Gorai.010G075300 I 0.731
Traes_1AL_88D49649D Triticum aestivum Traes_1AL_88D49649D I 0.730
Traes_1BL_E39CD252E Triticum aestivum Traes_1BL_E39CD252E I 0.730
F775_11989 Aegilops tauschii F775_11989 I 0.730
POPTR_0003s04920 Populus trichocarpa POPTR_0003s04920 I 0.729
GRMZM2G073047 Zea mays GRMZM2G073047 I 0.729
GRMZM5G806839 Zea mays GRMZM5G806839 I 0.728
Traes_7DL_538583735 Triticum aestivum Traes_7DL_538583735 I 0.727
ONIVA06G21640 Oryza nivara ONIVA06G21640 I 0.727
ORUFI06G19350 Oryza rufipogon ORUFI06G19350 I 0.727
Si007144m.g Setaria italica Si007144m.g I 0.727
F775_14820 Aegilops tauschii F775_14820 I 0.727
BRADI1G38110 Brachypodium distachyon BRADI1G38110 I 0.727
OMERI06G18780 Oryza meridionalis OMERI06G18780 I 0.727
OGLUM10G18570 Oryza glumaepatula OGLUM10G18570 I 0.726
OPUNC10G16830 Oryza punctata OPUNC10G16830 I 0.726
ONIVA10G21000 Oryza nivara ONIVA10G21000 I 0.726
OMERI08G00520 Oryza meridionalis OMERI08G00520 I 0.726
MTR_7g046260 Medicago truncatula MTR_7g046260 I 0.726
ORGLA10G0136200 Oryza glaberrima ORGLA10G0136200 I 0.726
Cucsa.312570 Cucumis sativus Cucsa.312570 I 0.725
GLYMA01G13410 Glycine max GLYMA01G13410 I 0.723
Cla017050 Citrullus lanatus Cla017050 I 0.722
Cucsa.116550 Cucumis sativus Cucsa.116550 I 0.722
ORGLA02G0087100 Oryza glaberrima ORGLA02G0087100 I 0.721
OPUNC02G08670 Oryza punctata OPUNC02G08670 I 0.721
Si018188m.g Setaria italica Si018188m.g I 0.721
OGLUM02G09810 Oryza glumaepatula OGLUM02G09810 I 0.721
OMERI02G10950 Oryza meridionalis OMERI02G10950 I 0.721
Pavir.Da00839 Panicum virgatum Pavir.Da00839 I 0.721
Cla023465 Citrullus lanatus Cla023465 I 0.721
GRMZM2G047918 Zea mays GRMZM2G047918 I 0.721
Pavir.Ab00844 Panicum virgatum Pavir.Ab00844 I 0.721
BRADI3G08790 Brachypodium distachyon BRADI3G08790 I 0.721
LPERR06G15020 Leersia perrieri LPERR06G15020 I 0.721
ORUFI02G09750 Oryza rufipogon ORUFI02G09750 I 0.721
ONIVA02G10590 Oryza nivara ONIVA02G10590 I 0.721
Sb01g029065 Sorghum bicolor Sb01g029065 I 0.720
Q8LKX0_MAIZE Zea mays Q8LKX0_MAIZE D 0.720
MLOC_17203 Hordeum vulgare MLOC_17203 I 0.720
GRMZM5G889719 Zea mays GRMZM5G889719 I 0.720
BRADI5G17640 Brachypodium distachyon BRADI5G17640 I 0.720
BRADI3G33355 Brachypodium distachyon BRADI3G33355 I 0.720
Pavir.Ia02208 Panicum virgatum Pavir.Ia02208 I 0.720
Si039427m.g Setaria italica Si039427m.g I 0.720
BRADI2G06180 Brachypodium distachyon BRADI2G06180 I 0.718
Bra027177 Brassica rapa Bra027177 I 0.718
GRMZM2G005301 Zea mays GRMZM2G005301 I 0.718
Bo5g126280 Brassica oleracea Bo5g126280 I 0.718
Traes_2BL_FC0F8A3DC Triticum aestivum Traes_2BL_FC0F8A3DC I 0.717
Traes_2DL_A336122501 Triticum aestivum Traes_2DL_A336122501 I 0.717
Traes_2AL_43491B9E0 Triticum aestivum Traes_2AL_43491B9E0 I 0.717
F775_04501 Aegilops tauschii F775_04501 I 0.717
OB06G25840 Oryza brachyantha OB06G25840 I 0.716
Pavir.Ab02603 Panicum virgatum Pavir.Ab02603 I 0.716
GRMZM2G041839 Zea mays GRMZM2G041839 I 0.716
GRMZM2G048621 Zea mays GRMZM2G048621 I 0.716
Si019772m.g Setaria italica Si019772m.g I 0.716
Pavir.Aa00833 Panicum virgatum Pavir.Aa00833 I 0.716
Cagra.6624s0013 Capsella grandiflora Cagra.6624s0013 I 0.715
Carubv10014506m.g Capsella rubella Carubv10014506m.g I 0.715
GSMUA_Achr10G14070_001 Musa acuminata GSMUA_Achr10G14070_001 I 0.715
Thhalv10022278m.g Eutrema salsugineum Thhalv10022278m.g I 0.715
scaffold_301905.1 Arabidopsis lyrata scaffold_301905.1 I 0.715
LPERR10G14320 Leersia perrieri LPERR10G14320 I 0.714
Solyc12g044390.1 Solanum lycopersicum Solyc12g044390.1 I 0.711
PGSC0003DMG400026461 Solanum tuberosum PGSC0003DMG400026461 I 0.711
PRUPE_ppa010130mg Prunus persica PRUPE_ppa010130mg I 0.709
Pm027339 Prunus mume Pm027339 I 0.709
mgf024816m Mimulus guttatus mgf024816m I 0.708
PGSC0003DMG400000365 Solanum tuberosum PGSC0003DMG400000365 I 0.707
Solyc12g008350.1 Solanum lycopersicum Solyc12g008350.1 I 0.707
Gorai.003G063500 Gossypium raimondii Gorai.003G063500 I 0.706
AC187157.4_FG001 Zea mays AC187157.4_FG001 I 0.705
Gorai.006G097000 Gossypium raimondii Gorai.006G097000 I 0.703
Cla015715 Citrullus lanatus Cla015715 I 0.702
AT3G16280 Arabidopsis thaliana AT3G16280 D 0.702
LjSGA_100683.2.1 Lotus japonicus LjSGA_100683.2.1 I 0.701
SapurV1A.0805s0100 Salix purpurea SapurV1A.0805s0100 I 0.701
POPTR_0001s18800 Populus trichocarpa POPTR_0001s18800 I 0.701
Pm013463 Prunus mume Pm013463 I 0.701
OS04G0550200 Oryza sativa OS04G0550200 I 0.700
Si012254m.g Setaria italica Si012254m.g I 0.700
Traes_6DL_3019F176A Triticum aestivum Traes_6DL_3019F176A I 0.700
OMERI04G17290 Oryza meridionalis OMERI04G17290 I 0.700
OMERI02G25910 Oryza meridionalis OMERI02G25910 I 0.700
ONIVA02G28990 Oryza nivara ONIVA02G28990 I 0.700
ONIVA04G19090 Oryza nivara ONIVA04G19090 I 0.700
BGIOSGA016884 Oryza indica BGIOSGA016884 I 0.700
OGLUM04G20790 Oryza glumaepatula OGLUM04G20790 I 0.700
MTR_6g088425 Medicago truncatula MTR_6g088425 I 0.700
Pavir.Gb01128 Panicum virgatum Pavir.Gb01128 I 0.700
OGLUM02G27070 Oryza glumaepatula OGLUM02G27070 I 0.700
MLOC_3095 Hordeum vulgare MLOC_3095 I 0.700
OPUNC02G24230 Oryza punctata OPUNC02G24230 I 0.700
Pavir.Ga01093 Panicum virgatum Pavir.Ga01093 I 0.700
ORUFI04G22430 Oryza rufipogon ORUFI04G22430 I 0.700
Pavir.Ga01094 Panicum virgatum Pavir.Ga01094 I 0.700
ORUFI02G28010 Oryza rufipogon ORUFI02G28010 I 0.700
ORGLA04G0179000 Oryza glaberrima ORGLA04G0179000 I 0.700
OPUNC04G18530 Oryza punctata OPUNC04G18530 I 0.700
LPERR02G21590 Leersia perrieri LPERR02G21590 I 0.700
PK01156.1 Cannabis sativa PK01156.1 I 0.700
OS02G0657000 Oryza sativa OS02G0657000 I 0.700
Cucsa.121080 Cucumis sativus Cucsa.121080 I 0.699
Ca_17883 Cicer arietinum Ca_17883 I 0.699
SapurV1A.2848s0020 Salix purpurea SapurV1A.2848s0020 I 0.698
BRADI3G50630 Brachypodium distachyon BRADI3G50630 I 0.698
SapurV1A.0370s0130 Salix purpurea SapurV1A.0370s0130 I 0.698
GRMZM2G172936 Zea mays GRMZM2G172936 I 0.698
LPERR04G16900 Leersia perrieri LPERR04G16900 I 0.698
GRMZM2G028969 Zea mays GRMZM2G028969 I 0.697
Lus10043240.g Linum usitatissimum Lus10043240.g I 0.696
Ca_14911 Cicer arietinum Ca_14911 I 0.696
Lus10011123.g Linum usitatissimum Lus10011123.g I 0.696
Lus10034949.g Linum usitatissimum Lus10034949.g I 0.696
Gorai.009G050200 Gossypium raimondii Gorai.009G050200 I 0.695
PRUPE_ppa011735mg Prunus persica PRUPE_ppa011735mg I 0.695
evm.TU.supercontig_40.39 Carica papaya evm.TU.supercontig_40.39 I 0.695
cassava15622.m1 Manihot esculenta cassava15622.m1 I 0.695
MTR_1g006660 Medicago truncatula MTR_1g006660 I 0.694
orange1.1g038538m.g Citrus sinensis orange1.1g038538m.g I 0.693
Ciclev10027587m.g Citrus clementina Ciclev10027587m.g I 0.693
Ciclev10006536m.g Citrus clementina Ciclev10006536m.g I 0.693
Eucgr.F03062 Eucalyptus grandis Eucgr.F03062 I 0.693
orange1.1g041015m.g Citrus sinensis orange1.1g041015m.g I 0.693
Pavir.Aa00834 Panicum virgatum Pavir.Aa00834 I 0.693
Pavir.Eb00249 Panicum virgatum Pavir.Eb00249 I 0.693
Sb03g002630 Sorghum bicolor Sb03g002630 I 0.693
Bra037041 Brassica rapa Bra037041 I 0.693
Bo1g009990 Brassica oleracea Bo1g009990 I 0.693
OPUNC06G16400 Oryza punctata OPUNC06G16400 I 0.693
TCM_028851 Theobroma cacao TCM_028851 I 0.693
Bra011383 Brassica rapa Bra011383 I 0.693
Si002749m.g Setaria italica Si002749m.g I 0.693
Thhalv10026204m.g Eutrema salsugineum Thhalv10026204m.g I 0.692
Bra034535 Brassica rapa Bra034535 I 0.692
mgf022971m Mimulus guttatus mgf022971m I 0.692
Bo7g115860 Brassica oleracea Bo7g115860 I 0.692
TRAES3BF073700060CFD_g Triticum aestivum TRAES3BF073700060CFD_g I 0.692
Bo3g171090 Brassica oleracea Bo3g171090 I 0.692
Bostr.28625s0062 Boechera stricta Bostr.28625s0062 I 0.690
OBART01G06440 Oryza barthii OBART01G06440 I 0.690
MDP0000652413 Malus domestica MDP0000652413 I 0.690
OMERI01G06530 Oryza meridionalis OMERI01G06530 I 0.690
OGLUM01G07430 Oryza glumaepatula OGLUM01G07430 I 0.690
OPUNC01G06210 Oryza punctata OPUNC01G06210 I 0.690
VIT_11s0016g03350 Vitis vinifera VIT_11s0016g03350 I 0.690
ORUFI01G06970 Oryza rufipogon ORUFI01G06970 I 0.690
ORGLA01G0061000 Oryza glaberrima ORGLA01G0061000 I 0.690
OS01G0200600 Oryza sativa OS01G0200600 I 0.690
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I 0.690
Solyc06g066540.1 Solanum lycopersicum Solyc06g066540.1 I 0.689
GLYMA01G35010 Glycine max GLYMA01G35010 I 0.688
Pavir.Ab02601 Panicum virgatum Pavir.Ab02601 I 0.688
GLYMA09G32730 Glycine max GLYMA09G32730 I 0.688
30146.m003535 Ricinus communis 30146.m003535 I 0.688
OBART02G09680 Oryza barthii OBART02G09680 I 0.686
ERF043 Arabidopsis thaliana AT4G32800 D 0.685
orange1.1g023148m.g Citrus sinensis orange1.1g023148m.g I 0.685
Carubv10006567m.g Capsella rubella Carubv10006567m.g I 0.685
Ciclev10024602m.g Citrus clementina Ciclev10024602m.g I 0.685
scaffold_700899.1 Arabidopsis lyrata scaffold_700899.1 I 0.685
Bostr.7867s1130 Boechera stricta Bostr.7867s1130 I 0.685
Cagra.4093s0009 Capsella grandiflora Cagra.4093s0009 I 0.685
chr1.CM0206.1000.nd Lotus japonicus chr1.CM0206.1000.nd I 0.684
PK29340.1 Cannabis sativa PK29340.1 I 0.683
ONIVA01G08000 Oryza nivara ONIVA01G08000 I 0.683
POPTR_0006s17670 Populus trichocarpa POPTR_0006s17670 I 0.683
Lus10001601.g Linum usitatissimum Lus10001601.g I 0.683
cassava11373.m1 Manihot esculenta cassava11373.m1 I 0.683
TCM_037811 Theobroma cacao TCM_037811 I 0.683
BGIOSGA002184 Oryza indica BGIOSGA002184 I 0.683
cassava10514.m1 Manihot esculenta cassava10514.m1 I 0.683
29912.m005463 Ricinus communis 29912.m005463 I 0.683
POPTR_0018s09270 Populus trichocarpa POPTR_0018s09270 I 0.683
Lus10002801.g Linum usitatissimum Lus10002801.g I 0.683
30174.m008790 Ricinus communis 30174.m008790 I 0.683
TCM_005639 Theobroma cacao TCM_005639 I 0.682
GLYMA15G02130 Glycine max GLYMA15G02130 I 0.682
BGIOSGA016883 Oryza indica BGIOSGA016883 I 0.681
SapurV1A.0540s0020 Salix purpurea SapurV1A.0540s0020 I 0.681
Lus10038607.g Linum usitatissimum Lus10038607.g I 0.681
SapurV1A.0033s0230 Salix purpurea SapurV1A.0033s0230 I 0.681
OBART04G20820 Oryza barthii OBART04G20820 I 0.681
OPUNC04G18520 Oryza punctata OPUNC04G18520 I 0.681
cassava29917.valid.m1 Manihot esculenta cassava29917.valid.m1 I 0.681
ORUFI04G22410 Oryza rufipogon ORUFI04G22410 I 0.681
OS04G0549800 Oryza sativa OS04G0549800 I 0.681
OGLUM04G20760 Oryza glumaepatula OGLUM04G20760 I 0.681
ONIVA04G19060 Oryza nivara ONIVA04G19060 I 0.681
ORGLA04G0178700 Oryza glaberrima ORGLA04G0178700 I 0.681
OMERI04G17270 Oryza meridionalis OMERI04G17270 I 0.681
cassava17387.m1 Manihot esculenta cassava17387.m1 I 0.681
Gorai.004G289800 Gossypium raimondii Gorai.004G289800 I 0.681
Bostr.25993s0277 Boechera stricta Bostr.25993s0277 I 0.680
POPTR_0002s14210 Populus trichocarpa POPTR_0002s14210 I 0.680
Pm017610 Prunus mume Pm017610 I 0.680
Cagra.0239s0048 Capsella grandiflora Cagra.0239s0048 I 0.680
Thhalv10001792m.g Eutrema salsugineum Thhalv10001792m.g I 0.680
Bo2g010530 Brassica oleracea Bo2g010530 I 0.680
PRUPE_ppa009812mg Prunus persica PRUPE_ppa009812mg I 0.680
fgenesh2_kg.4__2683__AT2G44940.1 Arabidopsis lyrata fgenesh2_kg.4__2683__AT2G44940.1 I 0.680
ERF034 Arabidopsis thaliana AT2G44940 D 0.680
MTR_6g088405 Medicago truncatula MTR_6g088405 I 0.680
LjSGA_095655.1 Lotus japonicus LjSGA_095655.1 I 0.680
Carubv10023699m.g Capsella rubella Carubv10023699m.g I 0.680
Gorai.007G087100 Gossypium raimondii Gorai.007G087100 I 0.679
cassava19912.m1 Manihot esculenta cassava19912.m1 I 0.679
cassava19875.m1 Manihot esculenta cassava19875.m1 I 0.679
GLYMA13G43210 Glycine max GLYMA13G43210 I 0.679
Bra015686 Brassica rapa Bra015686 I 0.679
Solyc08g078410.1 Solanum lycopersicum Solyc08g078410.1 I 0.679
Solyc08g078420.1 Solanum lycopersicum Solyc08g078420.1 I 0.679
PGSC0003DMG400004825 Solanum tuberosum PGSC0003DMG400004825 I 0.679
Bra023332 Brassica rapa Bra023332 I 0.678
Gorai.004G165300 Gossypium raimondii Gorai.004G165300 I 0.678
ORUFI10G19670 Oryza rufipogon ORUFI10G19670 I 0.678
MDP0000148178 Malus domestica MDP0000148178 I 0.677
VIT_09s0002g03940 Vitis vinifera VIT_09s0002g03940 I 0.677
Solyc03g120840.1 Solanum lycopersicum Solyc03g120840.1 I 0.677