CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR03G10190
(
Leersia perrieri
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
LPERR03G10190
T002575_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF014
M06581_2.00
Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR
Dap-seq
OMalley et al.(2016)
AT1G44830_col_a
0.704
0.824
ERF012
M06570_2.00
Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN
Dap-seq
OMalley et al.(2016)
DREB26_col_a
0.690
0.784
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR03G10190.1
AP2
27
78
RPYKGVRMRSWGSWVSEIRAPHQKRRIWLGSYATPEAAARAYDAALLCLKGS
Links
Other
AP2
family TFs
Other
Leersia perrieri
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy