LPERR09G02840 (Leersia perrieri)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 LPERR09G02840 T002649_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-12
M01046_2.00
Arabidopsis thaliana
RSMGBMNNNN

NNNNKVCKSY
PBM
Sullivan et al.(2014)
pTH7359
0.681 0.755
RAP2-12
M06588_2.00
Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN

NDNNNDHDDYGGCGGCGGHDN
Dap-seq
OMalley et al.(2016)
RAP212_col_a
0.681 0.755
RAP2-2
M00719_2.00
Arabidopsis thaliana
NNRBYGNN

NNCRVYNN
PBM
Chang et al.(2013)
pTH7227
0.680 0.755
ERF7
M01617_2.00
Arabidopsis thaliana
NGCCGNMNNN

NNNKNCGGCN
PBM
Weirauch et al.(2014)
pTH7606
0.680 0.612
ERF7
M06620_2.00
Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD

HGRCGGCGGHGRHRRNRDNDR
Dap-seq
OMalley et al.(2016)
ERF7_col_a
0.680 0.612
ERF7
M06621_2.00
Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH

DYGGCGGCGSHDDNDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF7_colamp_a
0.680 0.612
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR09G02840.1 AP2 85 136

Links

Other AP2 family TFs
Other Leersia perrieri TFs

227 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LPERR09G02820 Leersia perrieri LPERR09G02820 I 0.775
OB09G12530 Oryza brachyantha OB09G12530 I 0.744
F775_32653 Aegilops tauschii F775_32653 I 0.740
MLOC_13305 Hordeum vulgare MLOC_13305 I 0.740
Traes_4AS_094442636 Triticum aestivum Traes_4AS_094442636 I 0.738
Bo6g091540 Brassica oleracea Bo6g091540 I 0.735
Bra003883 Brassica rapa Bra003883 I 0.735
Sb01g045060 Sorghum bicolor Sb01g045060 I 0.730
Bo6g115850 Brassica oleracea Bo6g115850 I 0.727
Bra016063 Brassica rapa Bra016063 I 0.727
Solyc12g049560.1 Solanum lycopersicum Solyc12g049560.1 I 0.726
PGSC0003DMG400028853 Solanum tuberosum PGSC0003DMG400028853 I 0.726
Si036615m.g Setaria italica Si036615m.g I 0.725
LPERR09G02880 Leersia perrieri LPERR09G02880 N 0.723
Pavir.Fb01507 Panicum virgatum Pavir.Fb01507 I 0.722
GRMZM2G050851 Zea mays GRMZM2G050851 I 0.722
Pavir.J17283 Panicum virgatum Pavir.J17283 I 0.722
Carubv10020812m.g Capsella rubella Carubv10020812m.g I 0.719
Thhalv10018945m.g Eutrema salsugineum Thhalv10018945m.g I 0.719
Cagra.1013s0062 Capsella grandiflora Cagra.1013s0062 I 0.719
Solyc01g065980.2 Solanum lycopersicum Solyc01g065980.2 I 0.716
PGSC0003DMG400016812 Solanum tuberosum PGSC0003DMG400016812 I 0.716
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.714
GRMZM2G114820 Zea mays GRMZM2G114820 I 0.714
Sb04g035160 Sorghum bicolor Sb04g035160 I 0.713
GRMZM2G018984 Zea mays GRMZM2G018984 I 0.712
Sb07g022180 Sorghum bicolor Sb07g022180 I 0.711
GRMZM2G020150 Zea mays GRMZM2G020150 I 0.709
Pavir.J32835 Panicum virgatum Pavir.J32835 I 0.709
Pavir.J26885 Panicum virgatum Pavir.J26885 I 0.709
Pavir.Ib00526 Panicum virgatum Pavir.Ib00526 I 0.709
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.709
Pavir.J34139 Panicum virgatum Pavir.J34139 I 0.709
GRMZM2G174347 Zea mays GRMZM2G174347 I 0.707
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.707
TRIUR3_20682 Triticum urartu TRIUR3_20682 I 0.706
Traes_5BL_7F84602F3 Triticum aestivum Traes_5BL_7F84602F3 I 0.706
MLOC_38561 Hordeum vulgare MLOC_38561 I 0.706
Traes_5AL_14D9A9844 Triticum aestivum Traes_5AL_14D9A9844 I 0.706
F775_30714 Aegilops tauschii F775_30714 I 0.706
Traes_5DL_26F3B188A Triticum aestivum Traes_5DL_26F3B188A I 0.706
GLYMA12G13315 Glycine max GLYMA12G13315 I 0.706
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.706
Bra001640 Brassica rapa Bra001640 I 0.705
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.705
Bo3g068510 Brassica oleracea Bo3g068510 I 0.705
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.705
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.705
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.705
ONIVA09G04210 Oryza nivara ONIVA09G04210 I 0.704
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.704
BGIOSGA038064 Oryza indica BGIOSGA038064 I 0.704
ORGLA09G0030400 Oryza glaberrima ORGLA09G0030400 I 0.704
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.704
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.704
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.703
OMERI09G03030 Oryza meridionalis OMERI09G03030 I 0.703
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.703
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.703
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.703
Bostr.26675s0388 Boechera stricta Bostr.26675s0388 I 0.703
OBART01G06430 Oryza barthii OBART01G06430 I 0.702
OGLUM09G04690 Oryza glumaepatula OGLUM09G04690 I 0.702
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.702
OS09G0287000 Oryza sativa OS09G0287000 I 0.702
GRMZM2G148333 Zea mays GRMZM2G148333 I 0.702
ORUFI09G04420 Oryza rufipogon ORUFI09G04420 I 0.702
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.702
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.702
estExt_Genemark1.C_100079 Coccomyxa subellipsoidea C169 estExt_Genemark1.C_100079 I 0.700
OPUNC09G03540 Oryza punctata OPUNC09G03540 I 0.700
estExt_fgeneshCV_pg.C_120242 Chlorella vulgaris estExt_fgeneshCV_pg.C_120242 I 0.700
cassava42230.valid.m1 Manihot esculenta cassava42230.valid.m1 I 0.699
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.699
cassava42231.valid.m1 Manihot esculenta cassava42231.valid.m1 I 0.699
cassava34729.m1 Manihot esculenta cassava34729.m1 I 0.699
Ciclev10025816m.g Citrus clementina Ciclev10025816m.g I 0.699
orange1.1g020391m.g Citrus sinensis orange1.1g020391m.g I 0.699
AMTR_s00040p00180260 Amborella trichopoda AMTR_s00040p00180260 I 0.698
Cla010886 Citrullus lanatus Cla010886 I 0.696
mgf005222m Mimulus guttatus mgf005222m I 0.695
Si030514m.g Setaria italica Si030514m.g I 0.694
Gorai.013G169500 Gossypium raimondii Gorai.013G169500 I 0.693
GSMUA_Achr10G31090_001 Musa acuminata GSMUA_Achr10G31090_001 I 0.693
SELMODRAFT_17648 Selaginella moellendorffii SELMODRAFT_17648 I 0.693
SELMODRAFT_129122 Selaginella moellendorffii SELMODRAFT_129122 I 0.693
Aquca_076_00008 Aquilegia coerulea Aquca_076_00008 I 0.692
PDK_20s1440861g004 Phoenix dactylifera PDK_20s1440861g004 I 0.691
ORUFI09G12180 Oryza rufipogon ORUFI09G12180 I 0.690
BGIOSGA030816 Oryza indica BGIOSGA030816 I 0.690
Pavir.Bb02257 Panicum virgatum Pavir.Bb02257 I 0.690
Traes_5BL_FBC7AF288 Triticum aestivum Traes_5BL_FBC7AF288 I 0.690
OS09G0434500 Oryza sativa OS09G0434500 I 0.690
Si030088m.g Setaria italica Si030088m.g I 0.690
Sb02g025530 Sorghum bicolor Sb02g025530 I 0.690
OBART09G11390 Oryza barthii OBART09G11390 I 0.690
BRADI4G31040 Brachypodium distachyon BRADI4G31040 I 0.690
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I 0.690
ORGLA09G0085500 Oryza glaberrima ORGLA09G0085500 I 0.690
OLONG_007389 Oryza longistaminata OLONG_007389 I 0.690
ONIVA09G11170 Oryza nivara ONIVA09G11170 I 0.690
OMERI09G08870 Oryza meridionalis OMERI09G08870 I 0.690
LPERR09G08060 Leersia perrieri LPERR09G08060 I 0.690
OPUNC09G09870 Oryza punctata OPUNC09G09870 I 0.690
OGLUM09G11780 Oryza glumaepatula OGLUM09G11780 I 0.690
OB09G17960 Oryza brachyantha OB09G17960 I 0.690
Pavir.J01991 Panicum virgatum Pavir.J01991 I 0.690
Ciclev10023352m.g Citrus clementina Ciclev10023352m.g I 0.689
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I 0.689
orange1.1g043029m.g Citrus sinensis orange1.1g043029m.g I 0.689
OPUNC02G31100 Oryza punctata OPUNC02G31100 I 0.689
fgenesh2_kg.3__2537__AT3G23220.1 Arabidopsis lyrata fgenesh2_kg.3__2537__AT3G23220.1 I 0.689
Bra018864 Brassica rapa Bra018864 I 0.689
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I 0.689
BRADI1G72457 Brachypodium distachyon BRADI1G72457 I 0.688
mgf009667m Mimulus guttatus mgf009667m I 0.687
mgf010035m Mimulus guttatus mgf010035m I 0.687
Eucgr.K00734 Eucalyptus grandis Eucgr.K00734 I 0.686
Bo1g123160 Brassica oleracea Bo1g123160 I 0.685
Traes_6DL_DD82BD107 Triticum aestivum Traes_6DL_DD82BD107 I 0.685
Traes_6AL_DAA2D7F8A Triticum aestivum Traes_6AL_DAA2D7F8A I 0.685
TRIUR3_08978 Triticum urartu TRIUR3_08978 I 0.685
Bra021200 Brassica rapa Bra021200 I 0.685
Bra022176 Brassica rapa Bra022176 I 0.685
Traes_6BL_6AEADC565 Triticum aestivum Traes_6BL_6AEADC565 I 0.685
Pavir.Aa00281 Panicum virgatum Pavir.Aa00281 I 0.685
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.685
Si017568m.g Setaria italica Si017568m.g I 0.685
GRMZM2G018398 Zea mays GRMZM2G018398 I 0.685
GSMUA_Achr2G07300_001 Musa acuminata GSMUA_Achr2G07300_001 I 0.685
ONIVA06G06990 Oryza nivara ONIVA06G06990 I 0.685
F775_31907 Aegilops tauschii F775_31907 I 0.685
Pavir.J04875 Panicum virgatum Pavir.J04875 I 0.685
OSTLU_9237 Ostreococcus lucimarinus OSTLU_9237 I 0.684
Pavir.Cb01365 Panicum virgatum Pavir.Cb01365 I 0.684
Pavir.J21082 Panicum virgatum Pavir.J21082 I 0.684
fgenesh1_pm.chr_4_#_35 Ostreococcus RCC809 fgenesh1_pm.chr_4_#_35 I 0.684
Sb09g017950 Sorghum bicolor Sb09g017950 I 0.684
F775_15852 Aegilops tauschii F775_15852 I 0.684
estExt_fgenesh1_pg.C_Chr_04.00010339 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_04.00010339 I 0.684
Si018144m.g Setaria italica Si018144m.g I 0.683
AMTR_s00129p00119770 Amborella trichopoda AMTR_s00129p00119770 I 0.683
Lus10035076.g Linum usitatissimum Lus10035076.g I 0.682
LPERR04G16740 Leersia perrieri LPERR04G16740 I 0.682
Bo5g130490 Brassica oleracea Bo5g130490 I 0.682
cassava4507.m1 Manihot esculenta cassava4507.m1 I 0.682
Bostr.28625s0277 Boechera stricta Bostr.28625s0277 I 0.682
Bra027355 Brassica rapa Bra027355 I 0.682
RAP2-12 Arabidopsis thaliana AT1G53910 D 0.681
OPUNC04G18300 Oryza punctata OPUNC04G18300 I 0.681
BGIOSGA014605 Oryza indica BGIOSGA014605 I 0.681
ONIVA04G18900 Oryza nivara ONIVA04G18900 I 0.681
Carubv10009538m.g Capsella rubella Carubv10009538m.g I 0.681
ORGLA04G0177100 Oryza glaberrima ORGLA04G0177100 I 0.681
Thhalv10011606m.g Eutrema salsugineum Thhalv10011606m.g I 0.681
OS04G0546800 Oryza sativa OS04G0546800 I 0.681
Bostr.7128s0090 Boechera stricta Bostr.7128s0090 I 0.681
Cagra.0769s0008 Capsella grandiflora Cagra.0769s0008 I 0.681
ORUFI04G22230 Oryza rufipogon ORUFI04G22230 I 0.681
OGLUM04G20600 Oryza glumaepatula OGLUM04G20600 I 0.681
OMERI02G32080 Oryza meridionalis OMERI02G32080 I 0.681
OMERI04G17100 Oryza meridionalis OMERI04G17100 I 0.681
RAP2.12 Arabidopsis lyrata scaffold_105235.1 I 0.681
GSMUA_Achr1G25890_001 Musa acuminata GSMUA_Achr1G25890_001 I 0.681
RAP2.2 Arabidopsis lyrata scaffold_301660.1 I 0.680
ERF7 Arabidopsis thaliana AT3G20310 D 0.680
VIT_15s0021g01610 Vitis vinifera VIT_15s0021g01610 I 0.680
RAP2-2 Arabidopsis thaliana AT3G14230 D 0.680
Thhalv10020945m.g Eutrema salsugineum Thhalv10020945m.g I 0.680
Bra021543 Brassica rapa Bra021543 I 0.680
Cagra.1582s0005 Capsella grandiflora Cagra.1582s0005 I 0.680
VIT_15s0021g01590 Vitis vinifera VIT_15s0021g01590 I 0.680
GSMUA_Achr6G10870_001 Musa acuminata GSMUA_Achr6G10870_001 I 0.680
Carubv10013925m.g Capsella rubella Carubv10013925m.g I 0.680
VIT_15s0021g01600 Vitis vinifera VIT_15s0021g01600 I 0.680
evm.TU.supercontig_481.1 Carica papaya evm.TU.supercontig_481.1 I 0.679
Pavir.Ga01099 Panicum virgatum Pavir.Ga01099 I 0.679
SapurV1A.1700s0030 Salix purpurea SapurV1A.1700s0030 I 0.679
MDP0000308922 Malus domestica MDP0000308922 I 0.679
MDP0000403580 Malus domestica MDP0000403580 I 0.679
Lus10037448.g Linum usitatissimum Lus10037448.g I 0.679
Lus10013186.g Linum usitatissimum Lus10013186.g I 0.679
Pavir.Gb00956 Panicum virgatum Pavir.Gb00956 I 0.679
Gorai.011G056300 Gossypium raimondii Gorai.011G056300 I 0.679
gene05448-v1.0-hybrid Fragaria vesca gene05448-v1.0-hybrid I 0.679
POPTR_0001s16400 Populus trichocarpa POPTR_0001s16400 I 0.679
GLYMA03G42450 Glycine max GLYMA03G42450 I 0.679
GLYMA19G45200 Glycine max GLYMA19G45200 I 0.679
Sb06g024355 Sorghum bicolor Sb06g024355 I 0.679
Sb08g004260 Sorghum bicolor Sb08g004260 I 0.679
Si030692m.g Setaria italica Si030692m.g I 0.679
Eucgr.I02155 Eucalyptus grandis Eucgr.I02155 I 0.679
GRMZM2G055180 Zea mays GRMZM2G055180 I 0.679
GSMUA_Achr9G18090_001 Musa acuminata GSMUA_Achr9G18090_001 I 0.679
MTR_2g105380 Medicago truncatula MTR_2g105380 I 0.679
GSMUA_Achr3G10140_001 Musa acuminata GSMUA_Achr3G10140_001 I 0.679
GRMZM2G080516 Zea mays GRMZM2G080516 I 0.679
Si033388m.g Setaria italica Si033388m.g I 0.679
Si023329m.g Setaria italica Si023329m.g I 0.679
TCM_029232 Theobroma cacao TCM_029232 I 0.679
Cla015763 Citrullus lanatus Cla015763 I 0.679
cassava31609.valid.m1 Manihot esculenta cassava31609.valid.m1 I 0.679
cassava31610.valid.m1 Manihot esculenta cassava31610.valid.m1 I 0.679
Cucsa.359880 Cucumis sativus Cucsa.359880 I 0.679
Ca_16180 Cicer arietinum Ca_16180 I 0.679
27585.m000144 Ricinus communis 27585.m000144 I 0.679
VIT_09s0002g00470 Vitis vinifera VIT_09s0002g00470 I 0.679
Traes_2AL_158F8EE88 Triticum aestivum Traes_2AL_158F8EE88 I 0.678
MLOC_10878 Hordeum vulgare MLOC_10878 I 0.678
GRMZM2G173771 Zea mays GRMZM2G173771 I 0.678
Traes_2BL_CF47A74CC Triticum aestivum Traes_2BL_CF47A74CC I 0.678
Sb07g025843 Sorghum bicolor Sb07g025843 I 0.678
BGIOSGA030065 Oryza indica BGIOSGA030065 I 0.677
GSMUA_Achr11G15810_001 Musa acuminata GSMUA_Achr11G15810_001 I 0.677
GSMUA_Achr3G13010_001 Musa acuminata GSMUA_Achr3G13010_001 I 0.677
GRMZM2G103085 Zea mays GRMZM2G103085 I 0.677
ORUFI09G04400 Oryza rufipogon ORUFI09G04400 I 0.677
ORGLA09G0030300 Oryza glaberrima ORGLA09G0030300 I 0.677
OS09G0286600 Oryza sativa OS09G0286600 I 0.677
PGSC0003DMG400014594 Solanum tuberosum PGSC0003DMG400014594 I 0.677
Aquca_020_00575 Aquilegia coerulea Aquca_020_00575 I 0.677
OPUNC09G03530 Oryza punctata OPUNC09G03530 I 0.677
ONIVA09G04180 Oryza nivara ONIVA09G04180 I 0.677
MTR_8g022820 Medicago truncatula MTR_8g022820 I 0.677
OGLUM09G04680 Oryza glumaepatula OGLUM09G04680 I 0.677
OMERI09G03020 Oryza meridionalis OMERI09G03020 I 0.677
Pavir.J28880 Panicum virgatum Pavir.J28880 I 0.677