LPERR12G14340 (Leersia perrieri)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 LPERR12G14340 T002674_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.765 0.863
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.765 0.863
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR12G14340.1 AP2 38 89

Links

Other AP2 family TFs
Other Leersia perrieri TFs

243 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.765
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.770
mgf022810m Mimulus guttatus mgf022810m I 0.742
mgf022665m Mimulus guttatus mgf022665m I 0.763
mgf018851m Mimulus guttatus mgf018851m I 0.711
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.752
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.718
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.790
Cucsa.152770 Cucumis sativus Cucsa.152770 I 0.702
cassava9887.m1 Manihot esculenta cassava9887.m1 I 0.683
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.714
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.779
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.783
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.785
mgf023693m Mimulus guttatus mgf023693m I 0.742
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.785
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.775
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.758
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.785
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.711
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.678
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.752
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.787
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.765
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.765
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.765
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.685
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.762
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.702
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.711
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.695
Cla010474 Citrullus lanatus Cla010474 I 0.790
Ca_25424 Cicer arietinum Ca_25424 I 0.697
Ca_16397 Cicer arietinum Ca_16397 I 0.691
Ca_10494 Cicer arietinum Ca_10494 I 0.787
Ca_08232 Cicer arietinum Ca_08232 I 0.766
Ca_00417 Cicer arietinum Ca_00417 I 0.764
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.787
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.766
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.732
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.787
TCM_040015 Theobroma cacao TCM_040015 I 0.766
TCM_025913 Theobroma cacao TCM_025913 I 0.766
Cla012318 Citrullus lanatus Cla012318 I 0.752
Cla021590 Citrullus lanatus Cla021590 I 0.718
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.759
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.790
30174.m009031 Ricinus communis 30174.m009031 I 0.701
30174.m008961 Ricinus communis 30174.m008961 I 0.708
30084.m000185 Ricinus communis 30084.m000185 I 0.765
29813.m001543 Ricinus communis 29813.m001543 I 0.785
29635.m000461 Ricinus communis 29635.m000461 I 0.787
Pm030235 Prunus mume Pm030235 I 0.694
Pm025326 Prunus mume Pm025326 I 0.766
Pm015931 Prunus mume Pm015931 I 0.787
Pm008788 Prunus mume Pm008788 I 0.711
Pm000004 Prunus mume Pm000004 I 0.715
TCM_018659 Theobroma cacao TCM_018659 I 0.787
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.787
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.766
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.757
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.762
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.713
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.787
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.785
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.752
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.711
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.752
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.678
MDP0000551969 Malus domestica MDP0000551969 I 0.787
MDP0000525933 Malus domestica MDP0000525933 I 0.715
MDP0000276536 Malus domestica MDP0000276536 I 0.787
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.790
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.790
PK28640.1 Cannabis sativa PK28640.1 I 0.755
PK25269.1 Cannabis sativa PK25269.1 I 0.725
PK13330.1 Cannabis sativa PK13330.1 I 0.787
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.765
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.711
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.775
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.766
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.787
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.740
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.790
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.790
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.790
MDP0000197375 Malus domestica MDP0000197375 I 0.694
MDP0000157628 Malus domestica MDP0000157628 I 0.694
MDP0000138669 Malus domestica MDP0000138669 I 0.711
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.719
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.678
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.749
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.711
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.780
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.787
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.751
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.711
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.763
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.787
MDP0000177547 Malus domestica MDP0000177547 I 0.766
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.766
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.766
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.790
MDP0000133476 Malus domestica MDP0000133476 I 0.711
MDP0000128326 Malus domestica MDP0000128326 I 0.716
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.711
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.784
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.781
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.781
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.711
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.764
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.781
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.719
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.790
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.752
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.695
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.716
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.684
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.787
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.695
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.787
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.792
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.700
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.701
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.766
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.766
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.787
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.695
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.787
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.785
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.766
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.766
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.787
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.718
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.766
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.787
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.700
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.766
OBART12G17080 Oryza barthii OBART12G17080 I 0.787
OBART07G06690 Oryza barthii OBART07G06690 I 0.766
OB09G23520 Oryza brachyantha OB09G23520 I 0.712
OB07G15030 Oryza brachyantha OB07G15030 I 0.766
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.691
GRMZM2G019443 Zea mays GRMZM2G019443 I 0.716
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.707
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.678
Bra006518 Brassica rapa Bra006518 I 0.765
Bra002262 Brassica rapa Bra002262 I 0.765
Bo9g152440 Brassica oleracea Bo9g152440 I 0.765
Bo3g013830 Brassica oleracea Bo3g013830 I 0.765
Bo2g018360 Brassica oleracea Bo2g018360 I 0.765
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.787
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.716
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.766
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.713
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.761
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.826
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.689
Bra020063 Brassica rapa Bra020063 I 0.765
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.792
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.790
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.679
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.766
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.787
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.787
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.778
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.766
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.787
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.691
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.691
F775_04303 Aegilops tauschii F775_04303 I 0.748
F775_02727 Aegilops tauschii F775_02727 I 0.787
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.732
TCM_015579 Theobroma cacao TCM_015579 I 0.678
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.765
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.787
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.707
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.763
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.790
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.715
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.787
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.711
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.694
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.766
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.787
SELMODRAFT_17708 Selaginella moellendorffii SELMODRAFT_17708 I 0.720
SELMODRAFT_28575 Selaginella moellendorffii SELMODRAFT_28575 I 0.719
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.806
TCM_014471 Theobroma cacao TCM_014471 I 0.691
TCM_011632 Theobroma cacao TCM_011632 I 0.749
TCM_005425 Theobroma cacao TCM_005425 I 0.711
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.689
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.696
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.735
Si038848m.g Setaria italica Si038848m.g I 0.787
Si033237m.g Setaria italica Si033237m.g I 0.763
Si032213m.g Setaria italica Si032213m.g I 0.713
Si024417m.g Setaria italica Si024417m.g I 0.790
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.806
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.711
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.732
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.777
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.689
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.696
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.787
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.766
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.787
OS12G0582900 Oryza sativa OS12G0582900 I 0.787
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.775
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.718
OS07G0204000 Oryza sativa OS07G0204000 I 0.766
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.778
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.787
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.766
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.766
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.787
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.761
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.718
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.766
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.787
Ca_06590 Cicer arietinum Ca_06590 N 0.701
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.714
Ciclev10024614m.g Citrus clementina Ciclev10024614m.g N 0.736
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.720
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.727
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.718
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.722
mgf024137m Mimulus guttatus mgf024137m N 0.708
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.722
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.721
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.722
MDP0000127123 Malus domestica MDP0000127123 N 0.728
MTR_4g111915 Medicago truncatula MTR_4g111915 N 0.699
MTR_4g112490 Medicago truncatula MTR_4g112490 N 0.699
GLYMA20G03890 Glycine max GLYMA20G03890 N 0.714
MDP0000316843 Malus domestica MDP0000316843 N 0.714
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.722
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.722
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.718
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.720
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.724
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.724
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.721