LPERR12G14340 (Leersia perrieri)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 LPERR12G14340 T002674_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.765 0.863
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.765 0.863
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR12G14340.1 AP2 38 89

Links

Other AP2 family TFs
Other Leersia perrieri TFs

243 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30131.m007244 Ricinus communis 30131.m007244 N 0.000
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.000
Bo3g179450 Brassica oleracea Bo3g179450 N 0.000
Bra018848 Brassica rapa Bra018848 N 0.000
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.000
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.000
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.000
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.000
Ca_27441 Cicer arietinum Ca_27441 N 0.000
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.000
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.000
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.000
Cla006433 Citrullus lanatus Cla006433 N 0.000
Cla020893 Citrullus lanatus Cla020893 N 0.000
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.000
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.000
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.000
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.000
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.000
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.000
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.000
LjSGA_017153.1 Lotus japonicus LjSGA_017153.1 N 0.000
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.000
Lus10019773.g Linum usitatissimum Lus10019773.g N 0.000
Lus10039562.g Linum usitatissimum Lus10039562.g N 0.000
mgf022906m Mimulus guttatus mgf022906m N 0.000
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.000
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.000
PK02707.1 Cannabis sativa PK02707.1 N 0.000
Pm012190 Prunus mume Pm012190 N 0.000
Pm016466 Prunus mume Pm016466 N 0.000
Pm029840 Prunus mume Pm029840 N 0.000
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.000
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.000
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.000
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.000
SCL3 Arabidopsis thaliana AT1G50420 N 0.000
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.000
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.000
TCM_040833 Theobroma cacao TCM_040833 N 0.000
TCM_042392 Theobroma cacao TCM_042392 N 0.000
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.000