MTR_1g049140 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_1g049140 T002776_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TOE2
M00851_2.00
Arabidopsis thaliana
NNNNTACGAGGWN

NWCCTCGTANNNN
PBM
Franco-Zorrilla et al.(2014)
TOE2
0.851 0.979
SMZ
M08402_2.00
Arabidopsis thaliana
YCTCGTAC

GTACGAGR
ChIP-chip
Mathelier et al.(2014)
MA0553.1
0.836 0.938
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH41353 AP2 136 185
KEH41354 AP2 136 185
KEH41355 AP2 136 185

Links

Other AP2 family TFs
Other Medicago truncatula TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo6g068410 Brassica oleracea Bo6g068410 I 0.820
Bo8g087280 Brassica oleracea Bo8g087280 I 0.836
Bo9g141100 Brassica oleracea Bo9g141100 I 0.851
Bostr.0697s0115 Boechera stricta Bostr.0697s0115 I 0.836
Bostr.23794s0149 Boechera stricta Bostr.23794s0149 I 0.776
Bostr.26833s0222 Boechera stricta Bostr.26833s0222 I 0.851
Bra002510 Brassica rapa Bra002510 I 0.851
Bra007123 Brassica rapa Bra007123 I 0.836
Bra020262 Brassica rapa Bra020262 I 0.851
Cagra.0716s0040 Capsella grandiflora Cagra.0716s0040 I 0.776
Cagra.1317s0005 Capsella grandiflora Cagra.1317s0005 I 0.851
Cagra.1742s0021 Capsella grandiflora Cagra.1742s0021 I 0.836
Carubv10018526m.g Capsella rubella Carubv10018526m.g I 0.836
Carubv10023614m.g Capsella rubella Carubv10023614m.g I 0.776
Carubv10026292m.g Capsella rubella Carubv10026292m.g I 0.851
Ca_26761 Cicer arietinum Ca_26761 I 0.805
Cla020387 Citrullus lanatus Cla020387 I 0.848
Cucsa.165940 Cucumis sativus Cucsa.165940 I 0.848
Eucgr.G02793 Eucalyptus grandis Eucgr.G02793 I 0.836
gene23316-v1.0-hybrid Fragaria vesca gene23316-v1.0-hybrid I 0.811
GLYMA02G09600 Glycine max GLYMA02G09600 I 0.832
GLYMA10G22390 Glycine max GLYMA10G22390 I 0.832
Gorai.003G139800 Gossypium raimondii Gorai.003G139800 I 0.848
Gorai.011G241700 Gossypium raimondii Gorai.011G241700 I 0.848
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.848
Lus10040365.g Linum usitatissimum Lus10040365.g I 0.848
MDP0000130802 Malus domestica MDP0000130802 I 0.684
MDP0000281079 Malus domestica MDP0000281079 I 0.805
MDP0000285955 Malus domestica MDP0000285955 I 0.805
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.848
PGSC0003DMG400012038 Solanum tuberosum PGSC0003DMG400012038 I 0.848
PK16652.1 Cannabis sativa PK16652.1 I 0.848
Pm018608 Prunus mume Pm018608 I 0.815
PRUPE_ppa018704mg Prunus persica PRUPE_ppa018704mg I 0.815
Sb10g001490 Sorghum bicolor Sb10g001490 I 0.848
SMZ Arabidopsis thaliana AT3G54990 D 0.836
SMZ Arabidopsis lyrata fgenesh2_kg.5__1910__AT3G54990.1 I 0.836
SNZ Arabidopsis thaliana AT2G39250 I 0.776
SNZ Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001673 I 0.776
Thhalv10010513m.g Eutrema salsugineum Thhalv10010513m.g I 0.836
Thhalv10013367m.g Eutrema salsugineum Thhalv10013367m.g I 0.851
TOE2 Arabidopsis thaliana AT5G60120 D 0.851