MTR_1g070045 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_1g070045 T002786_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF095
M06624_2.00
Arabidopsis thaliana
YCDCCGCCGCCRYHD

HDRYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ESE1_col_a
0.753 0.740
ERF095
M06625_2.00
Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH

DRHGGCGGCGGHDRHRRNDR
Dap-seq
OMalley et al.(2016)
ESE1_colamp_a
0.753 0.740
ERF14
M01045_2.00
Arabidopsis thaliana
NVGCCGNCN

NGNCGGCBN
PBM
Sullivan et al.(2014)
pTH9793
0.749 0.740
Q5Y836_TOBAC
M09732_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF5_02
0.721 0.800
ERF1B
M01619_2.00
Arabidopsis thaliana
NMGCCGCCRN

NYGGCGGCKN
PBM
Weirauch et al.(2014)
pTH8795
0.716 0.820
ERF1B
M06626_2.00
Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN

NNNNNNNHDNHDRYGGCGGCKRHDNNDN
Dap-seq
OMalley et al.(2016)
ERF1_col_a
0.716 0.820
ERF1B
M06627_2.00
Arabidopsis thaliana
MGCCGCCD

HGGCGGCK
Dap-seq
OMalley et al.(2016)
ERF1_colamp_a
0.716 0.820
ERF1B
M09703_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2_01
0.716 0.820
ERF1B
M09704_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2
0.716 0.820
ERF096
M01630_2.00
Arabidopsis thaliana
NVGCCGNCNN

NNGNCGGCBN
PBM
Weirauch et al.(2014)
pTH7909
0.714 0.740
ERF15
M00718_2.00
Arabidopsis thaliana
NGSCGSCB

VGSCGSCN
PBM
Chang et al.(2013)
pTH7336
0.710 0.800
ERF15
M06604_2.00
Arabidopsis thaliana
NNNHNNHDBMGCCGCCDY

RHGGCGGCKVHDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF15_colamp_a
0.710 0.800
ERF15
M06605_2.00
Arabidopsis thaliana
NNYHDYMGCCGCCRY

RYGGCGGCKRHDRNN
Dap-seq
OMalley et al.(2016)
ERF15_col
0.710 0.800
ERF1A
M00848_2.00
Arabidopsis thaliana
NNNNRNN

NNYNNNN
PBM
Franco-Zorrilla et al.(2014)
ATERF1
0.710 0.760
ERF1A
M00720_2.00
Arabidopsis thaliana
NMGCCRNCN

NGNYGGCKN
PBM
Chang et al.(2013)
pTH7202
0.710 0.760
ERF106
M01628_2.00
Arabidopsis thaliana
NNNVCRVCN

NGBYGBNNN
PBM
Weirauch et al.(2014)
pTH7426
0.707 0.720
ERF2
M01631_2.00
Arabidopsis thaliana
NNNGCCGNCN

NGNCGGCNNN
PBM
Weirauch et al.(2014)
pTH8113
0.701 0.760
ERF2
M06672_2.00
Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND

HNRYGGCGGCGRHDRNDDNDD
Dap-seq
OMalley et al.(2016)
ERF2_col_a
0.701 0.760
ERF2
M06673_2.00
Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR

YGGCGGCKSHDNNDNNNNNNN
Dap-seq
OMalley et al.(2016)
ERF2_colamp_a
0.701 0.760
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD

HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.694 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH42544 AP2 64 116

Links

Other AP2 family TFs
Other Medicago truncatula TFs

669 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_07586 Capronia coronata A1O1_07586 N 0.000
A1O3_06292 Capronia epimyces A1O3_06292 I 0.000
A1O5_00524 Cladophialophora psammophila A1O5_00524 N 0.000
ACRE_080260 Acremonium chrysogenum ACRE_080260 N 0.000
CADANGAG00008033 Aspergillus niger CADANGAG00008033 I 0.000
ANIA_09050 Aspergillus nidulans CADANIAG00007803 N 0.000
FFUJ_11250 Fusarium fujikuroi FFUJ_11250 I 0.000
fgenesh1_pg.sca_12_chr5_2_0000282 Nectria haematococca fgenesh1_pg.sca_12_chr5_2_0000282 N 0.000
fgenesh1_pm.00153_#_158 Aspergillus carbonarius fgenesh1_pm.00153_#_158 I 0.000
G647_01556 Cladophialophora carrionii G647_01556 N 0.000
MGG_00096 Magnaporthe oryzae MGG_00096 N 0.000
NechaG80102 Fusarium solani NechaG80102 N 0.000
OIDMADRAFT_204080 Oidiodendron maius OIDMADRAFT_204080 I 0.000
PMAA_058100 Talaromyces marneffei PMAA_058100 N 0.000
PMAA_058100 Penicillium marneffei PMAA_058100 N 0.000
PMAA_073800 Penicillium marneffei PMAA_073800 N 0.000
PMAA_073800 Talaromyces marneffei PMAA_073800 N 0.000
PV05_03926 Exophiala xenobiotica PV05_03926 N 0.000
PV06_06827 Exophiala oligosperma PV06_06827 N 0.000
PV07_06280 Cladophialophora immunda PV07_06280 I 0.000
PV10_03184 Exophiala mesophila PV10_03184 N 0.000
PV11_05497 Exophiala sideris PV11_05497 N 0.000
PVAR5_8873 Byssochlamys spectabilis PVAR5_8873 N 0.000
S40288_04988 Stachybotrys chartarum S40288_04988 I 0.000
SPBR_02468 Sporothrix brasiliensis SPBR_02468 N 0.000
THITE_2132051 Thielavia terrestris THITE_2132051 I 0.000
TRIATDRAFT_34766 Trichoderma atroviride TRIATDRAFT_34766 N 0.000
TSTA_002040 Talaromyces stipitatus TSTA_002040 N 0.000
TSTA_009670 Talaromyces stipitatus TSTA_009670 N 0.000
U727_0042986001 Penicillium solitum U727_0042986001 N 0.000
Z519_00531 Cladophialophora bantiana Z519_00531 N 0.000
Z519_02517 Cladophialophora bantiana Z519_02517 N 0.000