MTR_1g070045 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_1g070045 T002786_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF095
M06624_2.00
Arabidopsis thaliana
YCDCCGCCGCCRYHD

HDRYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ESE1_col_a
0.753 0.740
ERF095
M06625_2.00
Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH

DRHGGCGGCGGHDRHRRNDR
Dap-seq
OMalley et al.(2016)
ESE1_colamp_a
0.753 0.740
ERF14
M01045_2.00
Arabidopsis thaliana
NVGCCGNCN

NGNCGGCBN
PBM
Sullivan et al.(2014)
pTH9793
0.749 0.740
Q5Y836_TOBAC
M09732_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF5_02
0.721 0.800
ERF1B
M01619_2.00
Arabidopsis thaliana
NMGCCGCCRN

NYGGCGGCKN
PBM
Weirauch et al.(2014)
pTH8795
0.716 0.820
ERF1B
M06626_2.00
Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN

NNNNNNNHDNHDRYGGCGGCKRHDNNDN
Dap-seq
OMalley et al.(2016)
ERF1_col_a
0.716 0.820
ERF1B
M06627_2.00
Arabidopsis thaliana
MGCCGCCD

HGGCGGCK
Dap-seq
OMalley et al.(2016)
ERF1_colamp_a
0.716 0.820
ERF1B
M09703_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2_01
0.716 0.820
ERF1B
M09704_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2
0.716 0.820
ERF096
M01630_2.00
Arabidopsis thaliana
NVGCCGNCNN

NNGNCGGCBN
PBM
Weirauch et al.(2014)
pTH7909
0.714 0.740
ERF15
M00718_2.00
Arabidopsis thaliana
NGSCGSCB

VGSCGSCN
PBM
Chang et al.(2013)
pTH7336
0.710 0.800
ERF15
M06604_2.00
Arabidopsis thaliana
NNNHNNHDBMGCCGCCDY

RHGGCGGCKVHDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF15_colamp_a
0.710 0.800
ERF15
M06605_2.00
Arabidopsis thaliana
NNYHDYMGCCGCCRY

RYGGCGGCKRHDRNN
Dap-seq
OMalley et al.(2016)
ERF15_col
0.710 0.800
ERF1A
M00848_2.00
Arabidopsis thaliana
NNNNRNN

NNYNNNN
PBM
Franco-Zorrilla et al.(2014)
ATERF1
0.710 0.760
ERF1A
M00720_2.00
Arabidopsis thaliana
NMGCCRNCN

NGNYGGCKN
PBM
Chang et al.(2013)
pTH7202
0.710 0.760
ERF106
M01628_2.00
Arabidopsis thaliana
NNNVCRVCN

NGBYGBNNN
PBM
Weirauch et al.(2014)
pTH7426
0.707 0.720
ERF2
M01631_2.00
Arabidopsis thaliana
NNNGCCGNCN

NGNCGGCNNN
PBM
Weirauch et al.(2014)
pTH8113
0.701 0.760
ERF2
M06672_2.00
Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND

HNRYGGCGGCGRHDRNDDNDD
Dap-seq
OMalley et al.(2016)
ERF2_col_a
0.701 0.760
ERF2
M06673_2.00
Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR

YGGCGGCKSHDNNDNNNNNNN
Dap-seq
OMalley et al.(2016)
ERF2_colamp_a
0.701 0.760
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD

HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.694 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH42544 AP2 64 116

Links

Other AP2 family TFs
Other Medicago truncatula TFs

669 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000016679 Ailuropoda melanoleuca ENSAMEG00000016679 I 0.000
Alligator_sinensis_CCG006380.1 Alligator sinensis Alligator_sinensis_CCG006380.1 I 0.000
ENSP00000281321-D1 Bos grunniens ENSP00000281321-D1 I 0.000
POU4F2 Bos taurus ENSBTAG00000005648 I 0.000
POU4F2 Callithrix jacchus ENSCJAG00000002462 I 0.000
POU4F2 Canis familiaris ENSCAFG00000007756 I 0.000
POU4F2 Cavia porcellus ENSCPOG00000013770 I 0.000
Cmyd_10009510 Chelonia mydas Cmyd_10009510 I 0.000
ENSCSAG00000003411 Chlorocebus sabaeus ENSCSAG00000003411 I 0.000
POU4F2 Dasypus novemcinctus ENSDNOG00000013134 I 0.000
Pou4f2 Dipodomys ordii ENSDORG00000004448 I 0.000
POU4F2 Equus caballus ENSECAG00000020754 I 0.000
POU4F2 Felis catus ENSFCAG00000003049 I 0.000
ENSGMOG00000000453 Gadus morhua ENSGMOG00000000453 I 0.000
POU4F2 Gorilla gorilla ENSGGOG00000001836 I 0.000
POU4F2 Homo sapiens ENSG00000151615 D 0.000
ENSSTOG00000021113 Ictidomys tridecemlineatus ENSSTOG00000021113 I 0.000
ENSLACG00000005883 Latimeria chalumnae ENSLACG00000005883 I 0.000
ENSLOCG00000008825 Lepisosteus oculatus ENSLOCG00000008825 I 0.000
POU4F2 Loxodonta africana ENSLAFG00000001505 I 0.000
POU4F2 Macaca mulatta ENSMMUG00000023440 I 0.000
ENSMEUG00000012973 Macropus eugenii ENSMEUG00000012973 I 0.000
ENSMICG00000000575 Microcebus murinus ENSMICG00000000575 I 0.000
POU4F2 Monodelphis domestica ENSMODG00000000557 I 0.000
ENSMPUG00000006963 Mustela putorius furo ENSMPUG00000006963 I 0.000
Pou4f2 Mus musculus ENSMUSG00000031688 I 0.000
Myotis_brandtii_POU4F2_10016901 Myotis brandtii Myotis_brandtii_POU4F2_10016901 I 0.000
POU4F2 Myotis lucifugus ENSMLUG00000015174 I 0.000
ENSNLEG00000005619 Nomascus leucogenys ENSNLEG00000005619 I 0.000
POU4F2 Ochotona princeps ENSOPRG00000011220 I 0.000
Ogr03813 Ophisaurus gracilis Ogr03813 I 0.000
POU4F2 Ornithorhynchus anatinus ENSOANG00000006897 I 0.000
POU4F2 Otolemur garnettii ENSOGAG00000028626 I 0.000
POU4F2 Pan troglodytes ENSPTRG00000016492 I 0.000
ENSPANG00000006551 Papio anubis ENSPANG00000006551 I 0.000
ENSPSIG00000001736 Pelodiscus sinensis ENSPSIG00000001736 I 0.000
Pvit_02490 Pogona vitticeps Pvit_02490 I 0.000
ENSPPYG00000015107 Pongo abelii ENSPPYG00000015107 I 0.000
POU4F2 Procavia capensis ENSPCAG00000002636 I 0.000
POU4F2 Pteropus vampyrus ENSPVAG00000011688 I 0.000
Pou4f2 Rattus norvegicus ENSRNOG00000012167 I 0.000
ENSSHAG00000013709 Sarcophilus harrisii ENSSHAG00000013709 I 0.000
POU4F2 Sorex araneus ENSSARG00000007463 I 0.000
ENSSSCG00000009034 Sus scrofa ENSSSCG00000009034 I 0.000
POU4F2 Sus scrofa ENSSSCG00000026015 I 0.000
POU4F2 Vicugna pacos ENSVPAG00000006925 I 0.000
pou4f2 Xenopus tropicalis XB-GENE-854899 I 0.000