MTR_1g097190 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_1g097190 T002800_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF11
M01606_2.00
Arabidopsis thaliana
NHGCCGNHNN

NNDNCGGCDN
PBM
Weirauch et al.(2014)
pTH8117
0.689 0.700
ERF11
M06575_2.00
Arabidopsis thaliana
NHNNHDSCGCCGYCRHHNNN

NNNDDYGRCGGCGSHDNNDN
Dap-seq
OMalley et al.(2016)
ERF11_colamp_a
0.689 0.700
ERF11
M06576_2.00
Arabidopsis thaliana
NHNYCKCCGCCGYHD

HDRCGGCGGMGRNDN
Dap-seq
OMalley et al.(2016)
ERF11_col_b
0.689 0.700
Q84J59_MAIZE
M09717_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BD1_01
0.687 0.640
ERF086
M06663_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYHD

HDRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
PUCHI_col_a
0.683 0.640
ERF086
M06664_2.00
Arabidopsis thaliana
NNNNHDHCKCCGCCGYHDHHDHNNN

NNNDHDDHDRCGGCGGMGDHDNNNN
Dap-seq
OMalley et al.(2016)
PUCHI_colamp_a
0.683 0.640
LEP
M06661_2.00
Arabidopsis thaliana
NBCKCCGCCGYHDHHDYHNHH

DDNDRHDDHDRCGGCGGMGVN
Dap-seq
OMalley et al.(2016)
LEP_col_a
0.678 0.680
ERF087
M06573_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYYD

HRRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
AT1G28160_col_a
0.678 0.660
ERF087
M06574_2.00
Arabidopsis thaliana
HDYCKCCGCCGYCR

YGRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
AT1G28160_colamp_a
0.678 0.660
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH43599 AP2 21 71

Links

Other AP2 family TFs
Other Medicago truncatula TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00010p00240320 Amborella trichopoda AMTR_s00010p00240320 I 0.703
AMTR_s00016p00238800 Amborella trichopoda AMTR_s00016p00238800 I 0.677
AMTR_s00057p00191330 Amborella trichopoda AMTR_s00057p00191330 I 0.703
Aquca_017_00248 Aquilegia coerulea Aquca_017_00248 I 0.683
Aquca_013_00162 Aquilegia coerulea Aquca_013_00162 I 0.681
fgenesh2_kg.1__2978__AT1G28160.1 Arabidopsis lyrata fgenesh2_kg.1__2978__AT1G28160.1 I 0.678
fgenesh2_kg.1__1396__AT1G12890.1 Arabidopsis lyrata fgenesh2_kg.1__1396__AT1G12890.1 I 0.728
LEP Arabidopsis lyrata scaffold_601402.1 I 0.678
PUCHI Arabidopsis lyrata fgenesh2_kg.6__1873__AT5G18560.1 I 0.683
ERF086 Arabidopsis thaliana AT5G18560 D 0.683
LEP Arabidopsis thaliana AT5G13910 D 0.678
ERF11 Arabidopsis thaliana AT1G28370 D 0.689
ERF087 Arabidopsis thaliana AT1G28160 D 0.678
ERF088 Arabidopsis thaliana AT1G12890 I 0.728
Bostr.26527s0355 Boechera stricta Bostr.26527s0355 I 0.683
Bostr.2902s0126 Boechera stricta Bostr.2902s0126 I 0.678
Bostr.13671s0161 Boechera stricta Bostr.13671s0161 I 0.733
BRADI3G44470 Brachypodium distachyon BRADI3G44470 I 0.686
BRADI1G18580 Brachypodium distachyon BRADI1G18580 I 0.687
Bo9g166320 Brassica oleracea Bo9g166320 I 0.677
Bo8g107890 Brassica oleracea Bo8g107890 I 0.731
Bo9g154770 Brassica oleracea Bo9g154770 I 0.683
Bo2g011600 Brassica oleracea Bo2g011600 I 0.678
Bo2g016580 Brassica oleracea Bo2g016580 I 0.683
Bo3g009410 Brassica oleracea Bo3g009410 I 0.682
Bo3g013220 Brassica oleracea Bo3g013220 I 0.683
Bo3g143080 Brassica oleracea Bo3g143080 I 0.678
Bo5g054550 Brassica oleracea Bo5g054550 I 0.677
Bo7g048420 Brassica oleracea Bo7g048420 I 0.678
Bra030076 Brassica rapa Bra030076 I 0.678
Bra026949 Brassica rapa Bra026949 I 0.731
Bra023684 Brassica rapa Bra023684 I 0.683
Bra023440 Brassica rapa Bra023440 I 0.678
Bra010901 Brassica rapa Bra010901 I 0.678
Bra008793 Brassica rapa Bra008793 I 0.677
Bra006466 Brassica rapa Bra006466 I 0.683
Bra006222 Brassica rapa Bra006222 I 0.682
Bra002168 Brassica rapa Bra002168 I 0.683
Cagra.5588s0020 Capsella grandiflora Cagra.5588s0020 I 0.678
Cagra.1822s0047 Capsella grandiflora Cagra.1822s0047 I 0.678
Cagra.0712s0022 Capsella grandiflora Cagra.0712s0022 I 0.683
Cagra.0568s0211 Capsella grandiflora Cagra.0568s0211 I 0.730
Carubv10002480m.g Capsella rubella Carubv10002480m.g I 0.678
Carubv10002663m.g Capsella rubella Carubv10002663m.g I 0.683
Carubv10012143m.g Capsella rubella Carubv10012143m.g I 0.678
Carubv10012659m.g Capsella rubella Carubv10012659m.g I 0.730
evm.TU.supercontig_70.47 Carica papaya evm.TU.supercontig_70.47 I 0.677
evm.TU.supercontig_16.148 Carica papaya evm.TU.supercontig_16.148 I 0.687
Ca_00514 Cicer arietinum Ca_00514 I 0.693
Ca_06835 Cicer arietinum Ca_06835 I 0.694
Cla009214 Citrullus lanatus Cla009214 I 0.682
Ciclev10006861m.g Citrus clementina Ciclev10006861m.g I 0.683
Ciclev10017494m.g Citrus clementina Ciclev10017494m.g I 0.677
orange1.1g037093m.g Citrus sinensis orange1.1g037093m.g I 0.677
orange1.1g044016m.g Citrus sinensis orange1.1g044016m.g I 0.683
Cucsa.126880 Cucumis sativus Cucsa.126880 I 0.678
Cucsa.253400 Cucumis sativus Cucsa.253400 I 0.683
Eucgr.B03565 Eucalyptus grandis Eucgr.B03565 I 0.677
Eucgr.I01576 Eucalyptus grandis Eucgr.I01576 I 0.677
Eucgr.H03870 Eucalyptus grandis Eucgr.H03870 I 0.687
Thhalv10014022m.g Eutrema salsugineum Thhalv10014022m.g I 0.683
Thhalv10008615m.g Eutrema salsugineum Thhalv10008615m.g I 0.728
Thhalv10009328m.g Eutrema salsugineum Thhalv10009328m.g I 0.686
Thhalv10015796m.g Eutrema salsugineum Thhalv10015796m.g I 0.678
gene22872-v1.0-hybrid Fragaria vesca gene22872-v1.0-hybrid I 0.678
gene06790-v1.0-hybrid Fragaria vesca gene06790-v1.0-hybrid I 0.687
GLYMA20G31293 Glycine max GLYMA20G31293 I 0.812
GLYMA17G02711 Glycine max GLYMA17G02711 I 0.687
GLYMA10G36300 Glycine max GLYMA10G36300 I 0.812
GLYMA07G37990 Glycine max GLYMA07G37990 I 0.687
Gorai.011G188200 Gossypium raimondii Gorai.011G188200 I 0.690
Gorai.005G058700 Gossypium raimondii Gorai.005G058700 I 0.703
Gorai.005G197800 Gossypium raimondii Gorai.005G197800 I 0.677
Gorai.006G264300 Gossypium raimondii Gorai.006G264300 I 0.687
Gorai.004G032500 Gossypium raimondii Gorai.004G032500 I 0.677
MLOC_73522 Hordeum vulgare MLOC_73522 I 0.679
LPERR07G22580 Leersia perrieri LPERR07G22580 I 0.687
LPERR04G07940 Leersia perrieri LPERR04G07940 I 0.686
LPERR02G14670 Leersia perrieri LPERR02G14670 I 0.688
LPERR08G04370 Leersia perrieri LPERR08G04370 I 0.753
Lus10033963.g Linum usitatissimum Lus10033963.g I 0.687
LjT18C07.30.nc Lotus japonicus LjT18C07.30.nc I 0.687
MDP0000778140 Malus domestica MDP0000778140 I 0.693
MDP0000467753 Malus domestica MDP0000467753 I 0.684
MDP0000264124 Malus domestica MDP0000264124 I 0.678
MDP0000263008 Malus domestica MDP0000263008 I 0.678
cassava21477.m1 Manihot esculenta cassava21477.m1 I 0.745
cassava11359.m1 Manihot esculenta cassava11359.m1 I 0.677
cassava11599.m1 Manihot esculenta cassava11599.m1 I 0.677
cassava21524.m1 Manihot esculenta cassava21524.m1 I 0.677
cassava21525.m1 Manihot esculenta cassava21525.m1 I 0.677
cassava21600.m1 Manihot esculenta cassava21600.m1 I 0.687
cassava46974.m1 Manihot esculenta cassava46974.m1 I 0.687
MTR_4g119270 Medicago truncatula MTR_4g119270 I 0.694
mgf025433m Mimulus guttatus mgf025433m I 0.734
mgf019421m Mimulus guttatus mgf019421m I 0.677
GSMUA_Achr7G17910_001 Musa acuminata GSMUA_Achr7G17910_001 I 0.743
GSMUA_Achr6G35320_001 Musa acuminata GSMUA_Achr6G35320_001 I 0.739
GSMUA_Achr8G06870_001 Musa acuminata GSMUA_Achr8G06870_001 I 0.687
GSMUA_AchrUn_randomG16100_001 Musa acuminata GSMUA_AchrUn_randomG16100_001 I 0.684
GSMUA_Achr3G02360_001 Musa acuminata GSMUA_Achr3G02360_001 I 0.681
GSMUA_Achr3G23710_001 Musa acuminata GSMUA_Achr3G23710_001 I 0.687
GSMUA_Achr8G30180_001 Musa acuminata GSMUA_Achr8G30180_001 I 0.684
GSMUA_Achr10G17370_001 Musa acuminata GSMUA_Achr10G17370_001 I 0.681
OBART07G25780 Oryza barthii OBART07G25780 I 0.687
OB04G18290 Oryza brachyantha OB04G18290 I 0.686
OB02G26200 Oryza brachyantha OB02G26200 I 0.688
ORGLA02G0159100 Oryza glaberrima ORGLA02G0159100 I 0.688
ORGLA07G0201100 Oryza glaberrima ORGLA07G0201100 I 0.687
ORGLA08G0039300 Oryza glaberrima ORGLA08G0039300 I 0.753
OGLUM02G18720 Oryza glumaepatula OGLUM02G18720 I 0.688
OGLUM04G10880 Oryza glumaepatula OGLUM04G10880 I 0.686
OGLUM08G04690 Oryza glumaepatula OGLUM08G04690 I 0.753
OGLUM07G25800 Oryza glumaepatula OGLUM07G25800 I 0.687
BGIOSGA027571 Oryza indica BGIOSGA027571 I 0.753
BGIOSGA023741 Oryza indica BGIOSGA023741 I 0.687
BGIOSGA006366 Oryza indica BGIOSGA006366 I 0.688
BGIOSGA016321 Oryza indica BGIOSGA016321 I 0.686
OMERI07G22420 Oryza meridionalis OMERI07G22420 I 0.687
OMERI04G09670 Oryza meridionalis OMERI04G09670 I 0.686
OMERI04G06880 Oryza meridionalis OMERI04G06880 I 0.688
ONIVA08G04340 Oryza nivara ONIVA08G04340 I 0.753
ONIVA07G25390 Oryza nivara ONIVA07G25390 I 0.687
ONIVA04G09120 Oryza nivara ONIVA04G09120 I 0.686
OPUNC08G04370 Oryza punctata OPUNC08G04370 I 0.753
OPUNC04G09190 Oryza punctata OPUNC04G09190 I 0.686
OPUNC07G24180 Oryza punctata OPUNC07G24180 I 0.687
ORUFI04G12370 Oryza rufipogon ORUFI04G12370 I 0.686
ORUFI08G04980 Oryza rufipogon ORUFI08G04980 I 0.753
ORUFI07G26720 Oryza rufipogon ORUFI07G26720 I 0.687
ORUFI02G19410 Oryza rufipogon ORUFI02G19410 I 0.688
OS04G0399800 Oryza sativa OS04G0399800 I 0.686
OS08G0173700 Oryza sativa OS08G0173700 I 0.753
OS07G0669500 Oryza sativa OS07G0669500 I 0.687
OS02G0520000 Oryza sativa OS02G0520000 I 0.688
Pavir.Ba00192 Panicum virgatum Pavir.Ba00192 I 0.687
Pavir.Aa01903 Panicum virgatum Pavir.Aa01903 I 0.684
Pavir.Ab01422 Panicum virgatum Pavir.Ab01422 I 0.684
Pavir.J16868 Panicum virgatum Pavir.J16868 I 0.686
Pavir.Gb01913 Panicum virgatum Pavir.Gb01913 I 0.686
POPTR_0008s19030 Populus trichocarpa POPTR_0008s19030 I 0.679
POPTR_0003s15940 Populus trichocarpa POPTR_0003s15940 I 0.677
POPTR_0003s07540 Populus trichocarpa POPTR_0003s07540 I 0.677
PUCHI Populus trichocarpa POPTR_0008s22750 I 0.683
POPTR_0001s15710 Populus trichocarpa POPTR_0001s15710 I 0.677
POPTR_0019s11780 Populus trichocarpa POPTR_0019s11780 I 0.746
POPTR_0001s12820 Populus trichocarpa POPTR_0001s12820 I 0.677
Pm007113 Prunus mume Pm007113 I 0.678
Pm008145 Prunus mume Pm008145 I 0.687
Pm013049 Prunus mume Pm013049 I 0.694
PRUPE_ppa023203mg Prunus persica PRUPE_ppa023203mg I 0.687
PRUPE_ppa018569mg Prunus persica PRUPE_ppa018569mg I 0.678
29726.m004013 Ricinus communis 29726.m004013 I 0.687
30131.m006951 Ricinus communis 30131.m006951 I 0.677
30128.m008571 Ricinus communis 30128.m008571 I 0.677
SapurV1A.1095s0050 Salix purpurea SapurV1A.1095s0050 I 0.746
SapurV1A.0022s0550 Salix purpurea SapurV1A.0022s0550 I 0.683
SapurV1A.0444s0130 Salix purpurea SapurV1A.0444s0130 I 0.677
SapurV1A.0069s0280 Salix purpurea SapurV1A.0069s0280 I 0.679
SapurV1A.0210s0020 Salix purpurea SapurV1A.0210s0020 I 0.677
SapurV1A.0122s0040 Salix purpurea SapurV1A.0122s0040 I 0.677
SapurV1A.0444s0140 Salix purpurea SapurV1A.0444s0140 I 0.677
Si032771m.g Setaria italica Si032771m.g I 0.687
Si015237m.g Setaria italica Si015237m.g I 0.696
Si012587m.g Setaria italica Si012587m.g I 0.686
Si019641m.g Setaria italica Si019641m.g I 0.684
Solyc04g072300.1 Solanum lycopersicum Solyc04g072300.1 I 0.692
Solyc03g006320.1 Solanum lycopersicum Solyc03g006320.1 I 0.678
Solyc11g045680.1 Solanum lycopersicum Solyc11g045680.1 I 0.677
Solyc01g067540.1 Solanum lycopersicum Solyc01g067540.1 I 0.686
PGSC0003DMG400002185 Solanum tuberosum PGSC0003DMG400002185 I 0.677
PGSC0003DMG400022667 Solanum tuberosum PGSC0003DMG400022667 I 0.686
PGSC0003DMG400002191 Solanum tuberosum PGSC0003DMG400002191 I 0.677
Sb07g004655 Sorghum bicolor Sb07g004655 I 0.692
Sb06g014800 Sorghum bicolor Sb06g014800 I 0.686
TCM_036616 Theobroma cacao TCM_036616 I 0.745
TCM_021164 Theobroma cacao TCM_021164 I 0.687
TCM_008270 Theobroma cacao TCM_008270 I 0.678
TCM_017382 Theobroma cacao TCM_017382 I 0.698
Traes_2BL_E7871AFBA Triticum aestivum Traes_2BL_E7871AFBA I 0.679
Traes_2BL_5DC21F3CD Triticum aestivum Traes_2BL_5DC21F3CD I 0.679
Traes_2BL_970693C1F Triticum aestivum Traes_2BL_970693C1F I 0.679
Traes_2AL_F24D031AA Triticum aestivum Traes_2AL_F24D031AA I 0.679
TRIUR3_35273 Triticum urartu TRIUR3_35273 I 0.679
LEP Vitis vinifera VIT_14s0068g00860 I 0.677
GRMZM2G079825 Zea mays GRMZM2G079825 I 0.686
GRMZM2G023708 Zea mays GRMZM2G023708 I 0.686
GRMZM2G047999 Zea mays GRMZM2G047999 I 0.691
GRMZM2G307119 Zea mays GRMZM2G307119 I 0.687
Q84J59_MAIZE Zea mays Q84J59_MAIZE D 0.687
GRMZM2G458437 Zea mays GRMZM2G458437 I 0.687