MTR_2g043030 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_2g043030 T002812_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF018
M00842_2.00
Arabidopsis thaliana
HRCCGDCMN

NKGHCGGYD
PBM
Franco-Zorrilla et al.(2014)
ORA47
0.748 0.820
ERF018
M01610_2.00
Arabidopsis thaliana
NRCCGNCHN

NDGNCGGYN
PBM
Weirauch et al.(2014)
pTH7215
0.748 0.820
ERF017
M06568_2.00
Arabidopsis thaliana
NHNYCRCCGWCMWH

DWKGWCGGYGRNDN
Dap-seq
OMalley et al.(2016)
At1g19210_col_a
0.742 0.820
ERF017
M06569_2.00
Arabidopsis thaliana
NNNHNNCRCCGWCMW

WKGWCGGYGNNDNNN
Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a
0.742 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES65613 AP2 17 68

Links

Other AP2 family TFs
Other Medicago truncatula TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.815
Ca_19295 Cicer arietinum Ca_19295 I 0.814
Ca_19296 Cicer arietinum Ca_19296 I 0.809
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.803
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.787
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.784
Ca_19297 Cicer arietinum Ca_19297 I 0.779
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.774
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.773
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.773
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.768
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.768
Ca_09124 Cicer arietinum Ca_09124 I 0.767
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.764
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.761
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.761
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.761
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.761
Ca_01683 Cicer arietinum Ca_01683 I 0.759
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.759
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.759
Pm027117 Prunus mume Pm027117 I 0.758
29739.m003716 Ricinus communis 29739.m003716 I 0.758
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.758
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.758
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.758
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.757
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.756
Bra016518 Brassica rapa Bra016518 I 0.756
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.756
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.756
Bo6g086740 Brassica oleracea Bo6g086740 I 0.756
Bra003780 Brassica rapa Bra003780 I 0.756
Bo8g068370 Brassica oleracea Bo8g068370 I 0.756
Bra031069 Brassica rapa Bra031069 I 0.755
Bo8g102870 Brassica oleracea Bo8g102870 I 0.755
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.755
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.754
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.754
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.752
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.752
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.751
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.751
TCM_037415 Theobroma cacao TCM_037415 I 0.751
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.751
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.749
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.749
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.749
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.749
mgf024162m Mimulus guttatus mgf024162m I 0.749
TCM_037486 Theobroma cacao TCM_037486 I 0.748
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.748
ERF018 Arabidopsis thaliana AT1G74930 D 0.748
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.748
MDP0000649022 Malus domestica MDP0000649022 I 0.747
mgf021940m Mimulus guttatus mgf021940m I 0.745
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.745
Bo6g119120 Brassica oleracea Bo6g119120 I 0.745
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.745
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.743
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.743
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.743
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.742
ERF017 Arabidopsis thaliana AT1G19210 D 0.742
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.742
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.742
Bra015882 Brassica rapa Bra015882 I 0.741
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.741
29739.m003647 Ricinus communis 29739.m003647 I 0.741
Cla011318 Citrullus lanatus Cla011318 I 0.739
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.739
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.739
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.739
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.738
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.738
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.738
Cla007584 Citrullus lanatus Cla007584 I 0.737
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.737
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.737
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.736
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.735
MDP0000704216 Malus domestica MDP0000704216 I 0.735
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.734
mgf025452m Mimulus guttatus mgf025452m I 0.733
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.732
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.727
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.727
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.726
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.725
Si019636m.g Setaria italica Si019636m.g I 0.723
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.723
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.721
Bra025719 Brassica rapa Bra025719 I 0.719
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.718
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.717
Bo3g015600 Brassica oleracea Bo3g015600 I 0.717
Bra006599 Brassica rapa Bra006599 I 0.717
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.714
Cla022291 Citrullus lanatus Cla022291 I 0.714
Bra002377 Brassica rapa Bra002377 I 0.711
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.711
Bo9g149820 Brassica oleracea Bo9g149820 I 0.711
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.711
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.711
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.707
ERF016 Arabidopsis thaliana AT5G21960 I 0.707
Bo2g023630 Brassica oleracea Bo2g023630 I 0.705
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.702
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.702
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.701
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.701
Bra020162 Brassica rapa Bra020162 I 0.700
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.699
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.698
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.695
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.695
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.694
PK18548.1 Cannabis sativa PK18548.1 I 0.691
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.684
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.683
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.683
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.683
OS02G0781300 Oryza sativa OS02G0781300 I 0.683
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.683
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.683
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.683
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.683
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.677