CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_2g438180
(
Medicago truncatula
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
MTR_2g438180
T002825_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH37374
AP2
12
64
VRYRGVRRRPWGKYGAEIRDPTKPTGRQWLGTFDTAEEAARAYDCEAIRLRGA
Links
Other
AP2
family TFs
Other
Medicago truncatula
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_17354
Cicer arietinum
Ca_17354
N
0.843
GLYMA15G17090
Glycine max
GLYMA15G17090
N
0.825
GLYMA09G05840
Glycine max
GLYMA09G05840
N
0.821
GLYMA15G17100
Glycine max
GLYMA15G17100
N
0.820
GLYMA09G05860
Glycine max
GLYMA09G05860
N
0.801
GLYMA09G05850
Glycine max
GLYMA09G05850
N
0.801
LPERR06G03670
Leersia perrieri
LPERR06G03670
N
0.754
ONIVA06G20210
Oryza nivara
ONIVA06G20210
N
0.736
ORGLA06G0037100
Oryza glaberrima
ORGLA06G0037100
N
0.736
ORUFI06G04020
Oryza rufipogon
ORUFI06G04020
N
0.736
OMERI06G04590
Oryza meridionalis
OMERI06G04590
N
0.736
OGLUM06G04110
Oryza glumaepatula
OGLUM06G04110
N
0.736
BGIOSGA022362
Oryza indica
BGIOSGA022362
N
0.736
OBART06G03990
Oryza barthii
OBART06G03990
N
0.736
OPUNC06G03800
Oryza punctata
OPUNC06G03800
N
0.730
ORUFI08G15950
Oryza rufipogon
ORUFI08G15950
N
0.729
OBART08G14070
Oryza barthii
OBART08G14070
N
0.729
BGIOSGA027003
Oryza indica
BGIOSGA027003
N
0.716
OGLUM08G14830
Oryza glumaepatula
OGLUM08G14830
N
0.709
ONIVA03G12480
Oryza nivara
ONIVA03G12480
N
0.703
orange1.1g041658m.g
Citrus sinensis
orange1.1g041658m.g
N
0.685
Ciclev10024448m.g
Citrus clementina
Ciclev10024448m.g
N
0.685