MTR_3g112440 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_3g112440 T002843_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.713 0.857
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.713 0.857
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.713 0.857
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.698 0.796
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.679 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH36215 AP2 37 88

Links

Other AP2 family TFs
Other Medicago truncatula TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.733
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.733
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.733
Ca_10770 Cicer arietinum Ca_10770 I 0.733
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.733
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.731
MDP0000250924 Malus domestica MDP0000250924 I 0.727
Bra003752 Brassica rapa Bra003752 I 0.723
Pm006274 Prunus mume Pm006274 I 0.723
Bo6g086320 Brassica oleracea Bo6g086320 I 0.723
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.723
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.722
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.720
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.720
mgf024545m Mimulus guttatus mgf024545m I 0.720
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.720
Cla021113 Citrullus lanatus Cla021113 I 0.720
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.720
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.719
MDP0000250927 Malus domestica MDP0000250927 I 0.719
Bo2g083920 Brassica oleracea Bo2g083920 I 0.718
Bra008200 Brassica rapa Bra008200 I 0.718
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.718
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.717
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.716
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.715
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.715
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.715
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.715
30170.m014115 Ricinus communis 30170.m014115 I 0.715
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.714
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.713
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.713
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.713
Bo6g119660 Brassica oleracea Bo6g119660 I 0.713
DREB2D Arabidopsis thaliana AT1G75490 D 0.713
Bra015840 Brassica rapa Bra015840 I 0.713
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.713
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.713
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.713
MDP0000141335 Malus domestica MDP0000141335 I 0.712
MDP0000295902 Malus domestica MDP0000295902 I 0.712
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.711
TCM_034132 Theobroma cacao TCM_034132 I 0.710
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.710
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.706
29680.m001737 Ricinus communis 29680.m001737 I 0.703
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.702
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.702
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.702
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.700
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.699
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.699
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.699
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.698
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.698
Bra002159 Brassica rapa Bra002159 I 0.698
DREB2G Arabidopsis thaliana AT5G18450 D 0.698
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.698
Bo9g155940 Brassica oleracea Bo9g155940 I 0.698
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.697
Pm003634 Prunus mume Pm003634 I 0.695
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.693
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.693
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.691
mgf017629m Mimulus guttatus mgf017629m I 0.689
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.688
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.688
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.688
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.686
Solyc04g080910.1 Solanum lycopersicum Solyc04g080910.1 I 0.685
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.685
PGSC0003DMG400003706 Solanum tuberosum PGSC0003DMG400003706 I 0.685
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.684
F775_02345 Aegilops tauschii F775_02345 I 0.684
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.684
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.684
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.684
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.684
Si024059m.g Setaria italica Si024059m.g I 0.684
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.684
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.683
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.683
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.682
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.682
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.681
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.681
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.681
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.681
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.681
DREB2C Oryza sativa OS08G0565200 I 0.681
Cla006713 Citrullus lanatus Cla006713 I 0.681
OB08G30790 Oryza brachyantha OB08G30790 I 0.681
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.681
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.681
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.681
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.681
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.679
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.679
PK07402.1 Cannabis sativa PK07402.1 D 0.679
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.679
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.678
Bo2g016490 Brassica oleracea Bo2g016490 I 0.678
Bo3g013160 Brassica oleracea Bo3g013160 I 0.678
Bra006460 Brassica rapa Bra006460 I 0.678
Bra023674 Brassica rapa Bra023674 I 0.678
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.678