MTR_4g061200 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_4g061200 T002853_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.846 0.980
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.835 0.949
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.821 0.939
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.789 0.827
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES88712 AP2 130 179
AES88712 AP2 222 278
KEH30075 AP2 130 179
KEH30075 AP2 222 273
KEH30076 AP2 130 179
KEH30076 AP2 222 273
KEH30077 AP2 130 179
KEH30077 AP2 222 278

Links

Other AP2 family TFs
Other Medicago truncatula TFs

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ca_14618 Cicer arietinum Ca_14618 I 0.851
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.847
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.846
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.846
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.846
Bo4g070350 Brassica oleracea Bo4g070350 I 0.845
Bra011939 Brassica rapa Bra011939 I 0.845
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.843
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.843
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.842
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.842
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.842
OS05G0121600 Oryza sativa OS05G0121600 I 0.842
28752.m000339 Ricinus communis 28752.m000339 I 0.842
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.842
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.842
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.842
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.842
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.842
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.842
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.842
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.842
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.842
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.842
Si025305m.g Setaria italica Si025305m.g I 0.842
Ca_02499 Cicer arietinum Ca_02499 I 0.842
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.842
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.842
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.842
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.842
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.842
MDP0000200319 Malus domestica MDP0000200319 I 0.841
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.841
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.841
Pm002492 Prunus mume Pm002492 I 0.841
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.841
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.841
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.841
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.841
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.841
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.841
TCM_022077 Theobroma cacao TCM_022077 I 0.841
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.841
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.841
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.839
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.839
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.839
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.839
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.839
PK07183.1 Cannabis sativa PK07183.1 I 0.839
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.839
OBART07G08110 Oryza barthii OBART07G08110 I 0.838
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.838
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.838
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.838
OS07G0235800 Oryza sativa OS07G0235800 I 0.838
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.838
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.838
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.838
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.838
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.838
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.837
Pm000974 Prunus mume Pm000974 I 0.837
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.837
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.837
MDP0000181606 Malus domestica MDP0000181606 I 0.837
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.837
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.836
TCM_042000 Theobroma cacao TCM_042000 I 0.836
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.836
F775_32962 Aegilops tauschii F775_32962 I 0.836
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.836
Cla018124 Citrullus lanatus Cla018124 I 0.836
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.836
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.836
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.836
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.836
Bra017809 Brassica rapa Bra017809 I 0.835
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.835
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.835
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.835
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.835
Ca_09295 Cicer arietinum Ca_09295 I 0.835
29805.m001494 Ricinus communis 29805.m001494 I 0.835
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.835
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.835
Bra011741 Brassica rapa Bra011741 I 0.835
AP2 Arabidopsis thaliana AT4G36920 I 0.835
Si036068m.g Setaria italica Si036068m.g I 0.835
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.835
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.835
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.835
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.835
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.835
Bo7g118400 Brassica oleracea Bo7g118400 I 0.835
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.835
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.835
Bo1g004960 Brassica oleracea Bo1g004960 I 0.835
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.835
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.834
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.834
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.834
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.834
Si029636m.g Setaria italica Si029636m.g I 0.834
PK02403.1 Cannabis sativa PK02403.1 I 0.834
Cla000716 Citrullus lanatus Cla000716 I 0.834
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.834
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.834
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.834
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.834
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.834
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.834
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.834
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.834
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.834
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.834
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.834
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.834
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.834
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.834
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.833
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.833
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.833
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.833
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.833
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.833
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.833
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.833
mgf009315m Mimulus guttatus mgf009315m I 0.833
mgf021945m Mimulus guttatus mgf021945m I 0.833
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.832
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.831
TCM_000665 Theobroma cacao TCM_000665 I 0.831
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.831
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.831
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.829
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.828
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.828
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.827
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.827
Si012635m.g Setaria italica Si012635m.g I 0.826
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.826
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.826
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.826
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.826
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.826
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.826
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.826
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.826
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.826
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.826
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.826
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.825
OB03G45870 Oryza brachyantha OB03G45870 I 0.825
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.825
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.825
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.824
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.824
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.823
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.823
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.823
29169.m000017 Ricinus communis 29169.m000017 I 0.823
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.823
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.822
Ca_12010 Cicer arietinum Ca_12010 I 0.822
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.822
mgf005133m Mimulus guttatus mgf005133m I 0.821
mgf010466m Mimulus guttatus mgf010466m I 0.821
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.821
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.821
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.820
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.820
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.819
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.819
MDP0000137561 Malus domestica MDP0000137561 I 0.818
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.817
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.817
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.817
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.817
Pm030172 Prunus mume Pm030172 I 0.817
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.816
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.815
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.815
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.815
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.815
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.814
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.814
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.814
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.814
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.814
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.812
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.812
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.812
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.812
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.812
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.812
OB06G29960 Oryza brachyantha OB06G29960 I 0.812
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.812
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.811
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.806
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.806
MDP0000163645 Malus domestica MDP0000163645 I 0.804
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.802
Bra012139 Brassica rapa Bra012139 I 0.800
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.800
Bo7g064000 Brassica oleracea Bo7g064000 I 0.800
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.798
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.798
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.797
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.797
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.796
Cla020549 Citrullus lanatus Cla020549 I 0.795
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.794
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.793
OS03G0818800 Oryza sativa OS03G0818800 I 0.792
P93632_MAIZE Zea mays P93632_MAIZE D 0.789
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.789
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.789
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.787
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.787
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.787
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.784
TOE3 Arabidopsis thaliana AT5G67180 I 0.783
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.783
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.783
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.783
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.783
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.782
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.782
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.782
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.779
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.778
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.778
Cla018549 Citrullus lanatus Cla018549 I 0.778
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.766
OMERI05G01620 Oryza meridionalis OMERI05G01620 N 0.743
ORUFI05G01620 Oryza rufipogon ORUFI05G01620 N 0.743
ONIVA05G01600 Oryza nivara ONIVA05G01600 N 0.743
OGLUM05G01570 Oryza glumaepatula OGLUM05G01570 N 0.743
Solyc09g007260.2 Solanum lycopersicum Solyc09g007260.2 N 0.735
TCM_043051 Theobroma cacao TCM_043051 N 0.716
Bostr.27991s0069 Boechera stricta Bostr.27991s0069 N 0.703
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.701
RAP2.7 Arabidopsis lyrata fgenesh2_kg.4__825__AT2G28550.1 N 0.699
Bo3g040110 Brassica oleracea Bo3g040110 N 0.699
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.690
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.689
PK14490.1 Cannabis sativa PK14490.1 I 0.689
Sb09g002080 Sorghum bicolor Sb09g002080 N 0.688
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.683
Solyc04g049800.2 Solanum lycopersicum Solyc04g049800.2 N 0.681
Si006371m.g Setaria italica Si006371m.g I 0.679