CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_4g061200
(
Medicago truncatula
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
MTR_4g061200
T002853_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD
HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.846
0.980
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.835
0.949
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.821
0.939
P93632_MAIZE
M09712_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.789
0.827
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES88712
AP2
130
179
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG
AES88712
AP2
222
278
SKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIQNNGREAMTNFEASTYEGEMKSAAI
KEH30075
AP2
130
179
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG
KEH30075
AP2
222
273
SKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIQNNGR
KEH30076
AP2
130
179
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG
KEH30076
AP2
222
273
SKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIQNNGR
KEH30077
AP2
130
179
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG
KEH30077
AP2
222
278
SKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIQNNGREAMTNFEASTYEGEMKSAAI
Links
Other
AP2
family TFs
Other
Medicago truncatula
TFs
253 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy