MTR_5g083340 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_5g083340 T002899_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.754 0.898
Q8H769_WHEAT
M09721_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.715 0.837
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.700 0.816
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.700 0.816
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.700 0.816
DREB2A
M06655_2.00
Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN

NNNNDRWGKCGGTKDHDNNNN
Dap-seq
OMalley et al.(2016)
DREB2_col_a
0.685 0.857
DREB2A
M06656_2.00
Arabidopsis thaliana
NHNHMACCGMCWTWD

HWAWGKCGGTKDNDN
Dap-seq
OMalley et al.(2016)
DREB2_colamp_a
0.685 0.857
Q1ESI9_MAIZE
M09714_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB2A_02
0.684 0.796
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.677 0.755
PK08602.1
M01098_2.00
Cannabis sativa
NYCACCGCYN

NRGCGGTGRN
PBM
Lambert et al.(2019)
pTH11421
0.677 0.755
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES99659 AP2 83 134

Links

Other AP2 family TFs
Other Medicago truncatula TFs

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.766
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.766
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.758
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.758
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.756
PK07402.1 Cannabis sativa PK07402.1 D 0.754
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.753
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.752
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.750
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.750
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.750
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.749
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.745
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.745
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.745
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.745
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.743
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.743
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.743
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.739
Cla006713 Citrullus lanatus Cla006713 I 0.738
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.737
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.737
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.736
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.734
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.732
29729.m002292 Ricinus communis 29729.m002292 I 0.730
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.720
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.720
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.720
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.720
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.720
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.720
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.720
OB01G13930 Oryza brachyantha OB01G13930 I 0.720
OBART01G04210 Oryza barthii OBART01G04210 I 0.720
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.720
DREB2A Oryza sativa OS01G0165000 I 0.720
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.720
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.720
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.719
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.717
Pm018989 Prunus mume Pm018989 I 0.717
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.716
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.715
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.715
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.715
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.715
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.715
F775_05774 Aegilops tauschii F775_05774 I 0.715
MDP0000290585 Malus domestica MDP0000290585 I 0.714
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.714
Si002067m.g Setaria italica Si002067m.g I 0.713
Pm015262 Prunus mume Pm015262 I 0.713
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.713
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.712
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.710
POPTR_0006s10510 Populus trichocarpa POPTR_0006s10510 I 0.709
MDP0000153866 Malus domestica MDP0000153866 I 0.709
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.708
MDP0000165880 Malus domestica MDP0000165880 I 0.708
MDP0000147009 Malus domestica MDP0000147009 I 0.708
MDP0000446783 Malus domestica MDP0000446783 I 0.708
Bo9g177130 Brassica oleracea Bo9g177130 I 0.707
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.707
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.707
Bo4g190040 Brassica oleracea Bo4g190040 I 0.706
Bra017011 Brassica rapa Bra017011 I 0.706
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.705
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.704
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.704
SapurV1A.0001s0300 Salix purpurea SapurV1A.0001s0300 I 0.704
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.704
Ca_12446 Cicer arietinum Ca_12446 I 0.703
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.702
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.702
SapurV1A.0620s0100 Salix purpurea SapurV1A.0620s0100 I 0.701
mgf024545m Mimulus guttatus mgf024545m I 0.701
DREB2D Arabidopsis thaliana AT1G75490 D 0.700
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.700
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.700
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.700
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.700
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.700
PK07829.1 Cannabis sativa PK07829.1 I 0.700
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.700
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.700
MDP0000880312 Malus domestica MDP0000880312 I 0.700
Bra003752 Brassica rapa Bra003752 I 0.700
Bo6g086320 Brassica oleracea Bo6g086320 I 0.700
Bo6g119660 Brassica oleracea Bo6g119660 I 0.700
Bra015840 Brassica rapa Bra015840 I 0.700
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.698
TCM_043275 Theobroma cacao TCM_043275 I 0.697
Pm003634 Prunus mume Pm003634 I 0.696
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.696
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.696
GLYMA02G42960 Glycine max GLYMA02G42960 I 0.696
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.696
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.696
GLYMA14G06080 Glycine max GLYMA14G06080 I 0.696
30170.m014115 Ricinus communis 30170.m014115 I 0.696
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.695
TCM_043306 Theobroma cacao TCM_043306 I 0.695
TCM_043302 Theobroma cacao TCM_043302 I 0.695
POPTR_0016s13380 Populus trichocarpa POPTR_0016s13380 I 0.695
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.694
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.694
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.694
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.693
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.693
MDP0000295902 Malus domestica MDP0000295902 I 0.692
Bo2g083920 Brassica oleracea Bo2g083920 I 0.692
MDP0000141335 Malus domestica MDP0000141335 I 0.692
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.692
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.692
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.692
Bra008200 Brassica rapa Bra008200 I 0.692
mgf017629m Mimulus guttatus mgf017629m I 0.692
F775_32062 Aegilops tauschii F775_32062 I 0.692
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.692
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.691
BRADI2G29960 Brachypodium distachyon BRADI2G29960 I 0.691
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.690
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.690
Cla021113 Citrullus lanatus Cla021113 I 0.690
Pm006274 Prunus mume Pm006274 I 0.690
Ca_10770 Cicer arietinum Ca_10770 I 0.690
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.690
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.690
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.690
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.690
Si022619m.g Setaria italica Si022619m.g I 0.689
MDP0000250924 Malus domestica MDP0000250924 I 0.688
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.688
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.688
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.688
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.687
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.687
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.686
Bra028759 Brassica rapa Bra028759 I 0.686
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.686
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.686
Bo2g006960 Brassica oleracea Bo2g006960 I 0.686
DREB2A Arabidopsis thaliana AT5G05410 D 0.685
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.684
MDP0000250927 Malus domestica MDP0000250927 I 0.684
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.684
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.684
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.683
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.683
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.683
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.682
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.682
TCM_034132 Theobroma cacao TCM_034132 I 0.682
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.682
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.681
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.681
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.681
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.681
mgf007881m Mimulus guttatus mgf007881m I 0.680
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.680
Cla001755 Citrullus lanatus Cla001755 I 0.680
Cla012194 Citrullus lanatus Cla012194 I 0.680
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.679
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.679
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.679
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.679
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.679
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.679
OBART03G05550 Oryza barthii OBART03G05550 I 0.679
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.679
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.679
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.679
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.679
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.679
Carubv10013771m.g Capsella rubella Carubv10013771m.g I 0.679
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.679
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.679
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.679
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.679
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.679
Cagra.1655s0066 Capsella grandiflora Cagra.1655s0066 I 0.679
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.679
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.679
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.679
DREB2E Oryza sativa OS03G0174400 I 0.679
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.679
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.677
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.677
DREB2G Arabidopsis thaliana AT5G18450 D 0.677
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.677
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.677
PK08602.1 Cannabis sativa PK08602.1 D 0.677
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.677
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.677
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.677
TCM_024756 Theobroma cacao TCM_024756 I 0.677
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.677
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.677
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.677
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.677
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.677
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.677
Ca_07264 Cicer arietinum Ca_07264 I 0.677
Bra002159 Brassica rapa Bra002159 I 0.677
Bo9g155940 Brassica oleracea Bo9g155940 I 0.677
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.677
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.677
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.677
27810.m000639 Ricinus communis 27810.m000639 I 0.677
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.677
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.677
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.677