MTR_5g083340 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_5g083340 T002899_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.754 0.898
Q8H769_WHEAT
M09721_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.715 0.837
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.700 0.816
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.700 0.816
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.700 0.816
DREB2A
M06655_2.00
Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN

NNNNDRWGKCGGTKDHDNNNN
Dap-seq
OMalley et al.(2016)
DREB2_col_a
0.685 0.857
DREB2A
M06656_2.00
Arabidopsis thaliana
NHNHMACCGMCWTWD

HWAWGKCGGTKDNDN
Dap-seq
OMalley et al.(2016)
DREB2_colamp_a
0.685 0.857
Q1ESI9_MAIZE
M09714_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB2A_02
0.684 0.796
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.677 0.755
PK08602.1
M01098_2.00
Cannabis sativa
NYCACCGCYN

NRGCGGTGRN
PBM
Lambert et al.(2019)
pTH11421
0.677 0.755
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES99659 AP2 83 134

Links

Other AP2 family TFs
Other Medicago truncatula TFs

Invalid Input OrderBy

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action