MTR_5g085070 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_5g085070 T002900_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF8
M01608_2.00
Arabidopsis thaliana
MGCCGNMNNN

NNNKNCGGCK
PBM
Weirauch et al.(2014)
pTH8095
0.703 0.745
ERF8
M06586_2.00
Arabidopsis thaliana
NYHDYCKCCGCCGYH

DRCGGCGGMGRHDRN
Dap-seq
OMalley et al.(2016)
ERF8_col_a
0.703 0.745
ERF8
M06587_2.00
Arabidopsis thaliana
HNNHDSCGCCGYCRHHDN

NHDDYGRCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
ERF8_colamp_a
0.703 0.745
ERF11
M01606_2.00
Arabidopsis thaliana
NHGCCGNHNN

NNDNCGGCDN
PBM
Weirauch et al.(2014)
pTH8117
0.696 0.702
ERF11
M06575_2.00
Arabidopsis thaliana
NHNNHDSCGCCGYCRHHNNN

NNNDDYGRCGGCGSHDNNDN
Dap-seq
OMalley et al.(2016)
ERF11_colamp_a
0.696 0.702
ERF11
M06576_2.00
Arabidopsis thaliana
NHNYCKCCGCCGYHD

HDRCGGCGGMGRNDN
Dap-seq
OMalley et al.(2016)
ERF11_col_b
0.696 0.702
OS05G0497200
M01636_2.00
Oryza sativa
CGSCGCCR

YGGCGSCG
PBM
Weirauch et al.(2014)
pTH8640
0.693 0.766
PK17878.1
M01099_2.00
Cannabis sativa
CGCCGYCR

YGRCGGCG
PBM
Lambert et al.(2019)
pTH10133
0.690 0.766
ERF3
M01607_2.00
Arabidopsis thaliana
CGCCGSCR

YGSCGGCG
PBM
Weirauch et al.(2014)
pTH8109
0.682 0.745
ERF3
M06584_2.00
Arabidopsis thaliana
YHDYCKCCGCCGYHD

HDRCGGCGGMGRHDR
Dap-seq
OMalley et al.(2016)
ERF3_col_a
0.682 0.745
ERF3
M06585_2.00
Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR

YGRCGGCGGHRNNDNHDDNN
Dap-seq
OMalley et al.(2016)
ERF3_colamp_a
0.682 0.745
ERF4
M01616_2.00
Arabidopsis thaliana
VCGCCGCC

GGCGGCGB
PBM
Weirauch et al.(2014)
pTH8156
0.677 0.745
ERF4
M06616_2.00
Arabidopsis thaliana
YCDCCGCCGCCRHHD

HDDYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF4_col_a
0.677 0.745
ERF4
M06617_2.00
Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN

NNHDDYGRCGGCGSNDNNDN
Dap-seq
OMalley et al.(2016)
ERF4_colamp_a
0.677 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES99819 AP2 49 100

Links

Other AP2 family TFs
Other Medicago truncatula TFs

175 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MTR_5g085100 Medicago truncatula MTR_5g085100 I 0.757
SELMODRAFT_72880 Selaginella moellendorffii SELMODRAFT_72880 I 0.725
SELMODRAFT_73144 Selaginella moellendorffii SELMODRAFT_73144 I 0.725
Cagra.1472s0014 Capsella grandiflora Cagra.1472s0014 I 0.719
Carubv10010374m.g Capsella rubella Carubv10010374m.g I 0.719
Bra030957 Brassica rapa Bra030957 I 0.709
Thhalv10011796m.g Eutrema salsugineum Thhalv10011796m.g I 0.709
Bo5g004090 Brassica oleracea Bo5g004090 I 0.709
Bostr.0124s0109 Boechera stricta Bostr.0124s0109 I 0.708
ATERF-8 Arabidopsis lyrata fgenesh2_kg.1__4394__AT1G53170.1 I 0.708
Si014474m.g Setaria italica Si014474m.g I 0.708
MDP0000310904 Malus domestica MDP0000310904 I 0.705
MDP0000236605 Malus domestica MDP0000236605 I 0.705
ERF8 Arabidopsis thaliana AT1G53170 D 0.703
e_gw1.117.76.1 Physcomitrella patens e_gw1.117.76.1 I 0.701
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.699
e_gw1.487.2.1 Physcomitrella patens e_gw1.487.2.1 I 0.699
MDP0000457509 Malus domestica MDP0000457509 I 0.698
e_gw1.138.99.1 Physcomitrella patens e_gw1.138.99.1 I 0.697
Lus10031526.g Linum usitatissimum Lus10031526.g I 0.696
ERF11 Arabidopsis thaliana AT1G28370 D 0.696
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I 0.695
GSMUA_Achr6G01440_001 Musa acuminata GSMUA_Achr6G01440_001 I 0.695
GSMUA_Achr4G06170_001 Musa acuminata GSMUA_Achr4G06170_001 I 0.694
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I 0.694
ONIVA05G22260 Oryza nivara ONIVA05G22260 I 0.693
OPUNC05G19220 Oryza punctata OPUNC05G19220 I 0.693
Cucsa.126860 Cucumis sativus Cucsa.126860 I 0.693
LPERR05G17470 Leersia perrieri LPERR05G17470 I 0.693
BGIOSGA017797 Oryza indica BGIOSGA017797 I 0.693
OMERI05G19480 Oryza meridionalis OMERI05G19480 I 0.693
Cucsa.190200 Cucumis sativus Cucsa.190200 I 0.693
OGLUM05G22780 Oryza glumaepatula OGLUM05G22780 I 0.693
Cla003319 Citrullus lanatus Cla003319 I 0.693
Cla020002 Citrullus lanatus Cla020002 I 0.693
ORGLA05G0187500 Oryza glaberrima ORGLA05G0187500 I 0.693
ORUFI05G22840 Oryza rufipogon ORUFI05G22840 I 0.693
OS05G0497200 Oryza sativa OS05G0497200 D 0.693
GLYMA10G04190 Glycine max GLYMA10G04190 I 0.692
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I 0.692
Pavir.Ea03148 Panicum virgatum Pavir.Ea03148 I 0.692
Aquca_036_00073 Aquilegia coerulea Aquca_036_00073 I 0.692
GLYMA13G18400 Glycine max GLYMA13G18400 I 0.692
gene29735-v1.0-hybrid Fragaria vesca gene29735-v1.0-hybrid I 0.691
Si014469m.g Setaria italica Si014469m.g I 0.691
GRMZM2G089995 Zea mays GRMZM2G089995 I 0.691
PRUPE_ppa012385mg Prunus persica PRUPE_ppa012385mg I 0.690
SapurV1A.0032s0450 Salix purpurea SapurV1A.0032s0450 I 0.690
TCM_029823 Theobroma cacao TCM_029823 I 0.690
PRUPE_ppa022435mg Prunus persica PRUPE_ppa022435mg I 0.690
chr6.CM0114.130.nc Lotus japonicus chr6.CM0114.130.nc I 0.690
PK17878.1 Cannabis sativa PK17878.1 D 0.690
Pm020210 Prunus mume Pm020210 I 0.690
mgf023367m Mimulus guttatus mgf023367m I 0.690
POPTR_0011s05570 Populus trichocarpa POPTR_0011s05570 I 0.690
Aquca_017_00628 Aquilegia coerulea Aquca_017_00628 I 0.690
orange1.1g030994m.g Citrus sinensis orange1.1g030994m.g I 0.690
evm.TU.supercontig_27.18 Carica papaya evm.TU.supercontig_27.18 I 0.690
Gorai.011G029700 Gossypium raimondii Gorai.011G029700 I 0.690
SapurV1A.0012s0570 Salix purpurea SapurV1A.0012s0570 I 0.690
cassava4486.m1 Manihot esculenta cassava4486.m1 I 0.690
Ca_00326 Cicer arietinum Ca_00326 I 0.690
ERF12 Vitis vinifera VIT_10s0003g00130 I 0.690
Pm010083 Prunus mume Pm010083 I 0.690
Ciclev10016982m.g Citrus clementina Ciclev10016982m.g I 0.690
cassava42971.valid.m1 Manihot esculenta cassava42971.valid.m1 I 0.690
30190.m011323 Ricinus communis 30190.m011323 I 0.690
TCM_030804 Theobroma cacao TCM_030804 I 0.690
Solyc02g077840.1 Solanum lycopersicum Solyc02g077840.1 I 0.690
GLYMA13G31010 Glycine max GLYMA13G31010 I 0.690
PGSC0003DMG400029713 Solanum tuberosum PGSC0003DMG400029713 I 0.690
POPTR_0004s04700 Populus trichocarpa POPTR_0004s04700 I 0.690
GLYMA15G08360 Glycine max GLYMA15G08360 I 0.690
MTR_2g014300 Medicago truncatula MTR_2g014300 I 0.690
Cla013723 Citrullus lanatus Cla013723 I 0.689
POPTR_0002s04430 Populus trichocarpa POPTR_0002s04430 I 0.689
Sb03g037085 Sorghum bicolor Sb03g037085 I 0.689
GSMUA_Achr6G00240_001 Musa acuminata GSMUA_Achr6G00240_001 I 0.688
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.688
GSMUA_Achr8G06870_001 Musa acuminata GSMUA_Achr8G06870_001 I 0.687
GSMUA_Achr3G23710_001 Musa acuminata GSMUA_Achr3G23710_001 I 0.687
Pavir.Eb03165 Panicum virgatum Pavir.Eb03165 I 0.687
MTR_8g069360 Medicago truncatula MTR_8g069360 I 0.687
Gorai.009G443400 Gossypium raimondii Gorai.009G443400 I 0.686
Bo3g182770 Brassica oleracea Bo3g182770 I 0.686
Cucsa.139820 Cucumis sativus Cucsa.139820 I 0.686
GSMUA_AchrUn_randomG16100_001 Musa acuminata GSMUA_AchrUn_randomG16100_001 I 0.685
Lus10033664.g Linum usitatissimum Lus10033664.g I 0.685
Bra036016 Brassica rapa Bra036016 I 0.685
Bo2g122260 Brassica oleracea Bo2g122260 I 0.685
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I 0.685
Ca_17824 Cicer arietinum Ca_17824 I 0.684
Cucsa.042770 Cucumis sativus Cucsa.042770 I 0.684
Ca_22534 Cicer arietinum Ca_22534 I 0.684
VIT_07s0141g00690 Vitis vinifera VIT_07s0141g00690 I 0.684
SELMODRAFT_73142 Selaginella moellendorffii SELMODRAFT_73142 I 0.684
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I 0.684
Sb07g006195 Sorghum bicolor Sb07g006195 I 0.684
Sb07g006200 Sorghum bicolor Sb07g006200 I 0.684
SELMODRAFT_49950 Selaginella moellendorffii SELMODRAFT_49950 I 0.684
Sb07g006190 Sorghum bicolor Sb07g006190 I 0.684
Thhalv10021456m.g Eutrema salsugineum Thhalv10021456m.g I 0.684
VIT_19s0090g01080 Vitis vinifera VIT_19s0090g01080 I 0.684
Sb07g006210 Sorghum bicolor Sb07g006210 I 0.684
GRMZM2G020054 Zea mays GRMZM2G020054 I 0.684
Carubv10014552m.g Capsella rubella Carubv10014552m.g I 0.684
ESR1 Arabidopsis thaliana AT1G12980 I 0.683
Cagra.0568s0219 Capsella grandiflora Cagra.0568s0219 I 0.683
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I 0.683
Carubv10011023m.g Capsella rubella Carubv10011023m.g I 0.683
evm.TU.supercontig_132.31 Carica papaya evm.TU.supercontig_132.31 I 0.683
Carubv10010284m.g Capsella rubella Carubv10010284m.g I 0.683
Bostr.13671s0153 Boechera stricta Bostr.13671s0153 I 0.683
gw1.130.147.1 Physcomitrella patens gw1.130.147.1 I 0.683
gw1.13.222.1 Physcomitrella patens gw1.13.222.1 I 0.683
MTR_2g078680 Medicago truncatula MTR_2g078680 I 0.683
ESR1 Arabidopsis lyrata scaffold_101444.1 I 0.683
GSMUA_Achr1G18230_001 Musa acuminata GSMUA_Achr1G18230_001 I 0.683
Cla005423 Citrullus lanatus Cla005423 I 0.683
MTR_1g069960 Medicago truncatula MTR_1g069960 I 0.683
Carubv10011585m.g Capsella rubella Carubv10011585m.g I 0.682
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I 0.682
Bra030094 Brassica rapa Bra030094 I 0.682
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I 0.682
TCM_031608 Theobroma cacao TCM_031608 I 0.682
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I 0.682
Thhalv10009947m.g Eutrema salsugineum Thhalv10009947m.g I 0.682
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I 0.682
Bo3g143340 Brassica oleracea Bo3g143340 I 0.682
Bo5g055840 Brassica oleracea Bo5g055840 I 0.682
Bo7g048190 Brassica oleracea Bo7g048190 I 0.682
ERF12 Arabidopsis thaliana AT1G28360 I 0.682
PK02998.1 Cannabis sativa PK02998.1 I 0.682
ERF3 Arabidopsis thaliana AT1G50640 D 0.682
Bra010881 Brassica rapa Bra010881 I 0.682
VIT_14s0081g00520 Vitis vinifera VIT_14s0081g00520 I 0.682
GLYMA06G35710 Glycine max GLYMA06G35710 I 0.682
Bra032898 Brassica rapa Bra032898 I 0.682
GLYMA03G31640 Glycine max GLYMA03G31640 I 0.682
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I 0.682
GLYMA12G26836 Glycine max GLYMA12G26836 I 0.682
GLYMA13G34920 Glycine max GLYMA13G34920 I 0.682
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I 0.682
GLYMA12G35550 Glycine max GLYMA12G35550 I 0.682
27904.m000217 Ricinus communis 27904.m000217 I 0.682
GLYMA03G31930 Glycine max GLYMA03G31930 I 0.682
Cagra.1822s0023 Capsella grandiflora Cagra.1822s0023 I 0.682
Ca_12205 Cicer arietinum Ca_12205 I 0.682
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.682
Bostr.15697s0156 Boechera stricta Bostr.15697s0156 I 0.682
GSMUA_Achr5G09940_001 Musa acuminata GSMUA_Achr5G09940_001 I 0.682
ERF12 Arabidopsis lyrata fgenesh2_kg.1__3004__AT1G28360.1 I 0.682
SapurV1A.1244s0010 Salix purpurea SapurV1A.1244s0010 I 0.681
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.681
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.681
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.681
Eucgr.F01164 Eucalyptus grandis Eucgr.F01164 I 0.681
PRUPE_ppa010982mg Prunus persica PRUPE_ppa010982mg I 0.680
PDK_20s1354201g001 Phoenix dactylifera PDK_20s1354201g001 I 0.680
Bra026942 Brassica rapa Bra026942 I 0.680
Bo8g107780 Brassica oleracea Bo8g107780 I 0.680
Pm011391 Prunus mume Pm011391 I 0.680
MDP0000324718 Malus domestica MDP0000324718 I 0.679
MTR_3g053690 Medicago truncatula MTR_3g053690 I 0.679
MTR_8g006825 Medicago truncatula MTR_8g006825 I 0.678
MDP0000868587 Malus domestica MDP0000868587 I 0.678
ERF4 Arabidopsis thaliana AT3G15210 D 0.677
Bostr.28625s0184 Boechera stricta Bostr.28625s0184 I 0.677
POPTR_0005s24110 Populus trichocarpa POPTR_0005s24110 I 0.677
chr1.CM0375.170.nd Lotus japonicus chr1.CM0375.170.nd I 0.677
Bra001588 Brassica rapa Bra001588 I 0.677
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I 0.677
ATERF-4 Arabidopsis lyrata scaffold_301765.1 I 0.677
Thhalv10003431m.g Eutrema salsugineum Thhalv10003431m.g I 0.677
Bo3g066710 Brassica oleracea Bo3g066710 I 0.677