MTR_6g465850 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_6g465850 T002919_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1D
M06678_2.00
Arabidopsis thaliana
NHBRCCGACRTNN

NNAYGTCGGYVDN
Dap-seq
OMalley et al.(2016)
CBF4_col_a
0.710 0.800
DREB1D
M06679_2.00
Arabidopsis thaliana
HYRCCGACATND

HNATGTCGGYRD
Dap-seq
OMalley et al.(2016)
CBF4_colamp_a
0.710 0.800
DREB1C
M01623_2.00
Arabidopsis thaliana
RCCGACAT

ATGTCGGY
PBM
Weirauch et al.(2014)
pTH8187
0.686 0.780
DREB1C
M06639_2.00
Arabidopsis thaliana
NNNHBRCCGACATNN

NNATGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF2_col_a
0.686 0.780
DREB1C
M06640_2.00
Arabidopsis thaliana
NYBRCCGACATVN

NBATGTCGGYVRN
Dap-seq
OMalley et al.(2016)
CBF2_colamp_a
0.686 0.780
DREB1A
M01624_2.00
Arabidopsis thaliana
NRCCGACNNN

NNNGTCGGYN
PBM
Weirauch et al.(2014)
pTH8163
0.685 0.800
DREB1A
M01625_2.00
Arabidopsis thaliana
NNRCCGACNW

WNGTCGGYNN
PBM
Weirauch et al.(2014)
pTH9718
0.685 0.800
DREB1A
M06641_2.00
Arabidopsis thaliana
HNYBRCCGACDWNN

NNWHGTCGGYVRND
Dap-seq
OMalley et al.(2016)
CBF3_col_a
0.685 0.800
DREB1A
M06642_2.00
Arabidopsis thaliana
YBRCCGACATN

NATGTCGGYVR
Dap-seq
OMalley et al.(2016)
CBF3_colamp_a
0.685 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH26604 AP2 61 112

Links

Other AP2 family TFs
Other Medicago truncatula TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Obox7 Mus musculus ENSMUSG00000055942 I 0.000
EFV59996 Trichinella spiralis EFV59996 N 0.000
SMTD_0000532701 Schistosoma mattheei SMTD_0000532701 N 0.000
SMTD_0001176901 Schistosoma mattheei SMTD_0001176901 N 0.000
SMTD_0001311201 Schistosoma mattheei SMTD_0001311201 N 0.000
SPER_0000113901 Spirometra erinaceieuropaei SPER_0000113901 N 0.000
SPER_0000700401 Spirometra erinaceieuropaei SPER_0000700401 N 0.000
SPER_0000756001 Spirometra erinaceieuropaei SPER_0000756001 N 0.000
SROB_0000847001 Schistosoma rodhaini SROB_0000847001 N 0.000
SROB_0001175701 Schistosoma rodhaini SROB_0001175701 N 0.000
T265_03375 Opisthorchis viverrini T265_03375 N 0.000
TASK_0001026901 Taenia asiatica TASK_0001026901 N 0.000
TRE_0001513201 Trichobilharzia regenti TRE_0001513201 N 0.000
TsM_000433500 Taenia solium TsM_000433500 N 0.000
TsM_000683500 Taenia solium TsM_000683500 N 0.000
SMRZ_0000101501 Schistosoma margrebowiei SMRZ_0000101501 N 0.000
SCUD_0001462201 Schistosoma curassoni SCUD_0001462201 N 0.000
SCUD_0001375201 Schistosoma curassoni SCUD_0001375201 N 0.000
EFV60006 Trichinella spiralis EFV60006 N 0.000
GD19379 Drosophila simulans FBgn0085026 N 0.000
PHUM317730 Pediculus humanus PHUM317730 N 0.000
Smp_030050 Schistosoma mansoni Smp_030050 N 0.000
SMU15032406 Schmidtea mediterranea SMU15032406 N 0.000
BGLB001559 Biomphalaria glabrata BGLB001559 N 0.000
csin104516 Clonorchis sinensis csin104516 N 0.000
DILT_0000804401 Diphyllobothrium latum DILT_0000804401 N 0.000
HDID_0000158701 Hymenolepis diminuta HDID_0000158701 N 0.000
MhA1_Contig1584.frz3.gene20 Meloidogyne hapla MhA1_Contig1584.frz3.gene20 N 0.000
PXEA_0001780701 Protopolystoma xenopodis PXEA_0001780701 N 0.000
PXEA_0002877701 Protopolystoma xenopodis PXEA_0002877701 N 0.000
SBAD_0000181501 Soboliphyme baturini SBAD_0000181501 N 0.000
TsM_001091900 Taenia solium TsM_001091900 N 0.000