MTR_7g028925 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_7g028925 T002928_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.697 0.894
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.697 0.894
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.677 0.830
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.677 0.830
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH21998 AP2 27 75

Links

Other AP2 family TFs
Other Medicago truncatula TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.729
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.729
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.721
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.715
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.706
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.705
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.705
Ca_09124 Cicer arietinum Ca_09124 I 0.701
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.700
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.700
Ca_01683 Cicer arietinum Ca_01683 I 0.698
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.698
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.698
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.698
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.698
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.697
ERF017 Arabidopsis thaliana AT1G19210 D 0.697
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.697
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.697
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.697
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.697
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.696
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.696
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.695
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.695
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.691
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.691
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.690
mgf021940m Mimulus guttatus mgf021940m I 0.687
Bra003780 Brassica rapa Bra003780 I 0.686
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.686
Bo8g102870 Brassica oleracea Bo8g102870 I 0.685
Bo6g086740 Brassica oleracea Bo6g086740 I 0.685
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.685
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.685
Bra031069 Brassica rapa Bra031069 I 0.685
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.684
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.684
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.684
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.684
29739.m003647 Ricinus communis 29739.m003647 I 0.684
TCM_037486 Theobroma cacao TCM_037486 I 0.683
Bra016518 Brassica rapa Bra016518 I 0.683
Bo8g068370 Brassica oleracea Bo8g068370 I 0.683
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.682
TCM_037415 Theobroma cacao TCM_037415 I 0.682
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.682
mgf024162m Mimulus guttatus mgf024162m I 0.680
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.679
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.678
ERF018 Arabidopsis thaliana AT1G74930 D 0.677
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.677
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.677