MTR_7g100590 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_7g100590 T002946_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.840 0.949
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.828 0.949
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.824 0.959
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.796 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES81788 AP2 138 187
AES81788 AP2 230 281

Links

Other AP2 family TFs
Other Medicago truncatula TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28752.m000339 Ricinus communis 28752.m000339 I 0.847
29169.m000017 Ricinus communis 29169.m000017 I 0.830
29805.m001494 Ricinus communis 29805.m001494 I 0.842
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.847
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.788
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.820
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.823
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.847
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.824
AP2 Arabidopsis thaliana AT4G36920 I 0.840
TOE3 Arabidopsis thaliana AT5G67180 I 0.790
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.816
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.832
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.847
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.821
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.823
Bo1g004960 Brassica oleracea Bo1g004960 I 0.840
Bo4g070350 Brassica oleracea Bo4g070350 I 0.822
Bo7g064000 Brassica oleracea Bo7g064000 I 0.786
Bo7g118400 Brassica oleracea Bo7g118400 I 0.840
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.790
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.840
Bra011741 Brassica rapa Bra011741 I 0.840
Bra011939 Brassica rapa Bra011939 I 0.822
Bra012139 Brassica rapa Bra012139 I 0.786
Bra017809 Brassica rapa Bra017809 I 0.840
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.830
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.821
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.841
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.831
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.790
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.824
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.840
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.840
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.824
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.790
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.830
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.847
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.799
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.827
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.847
Ca_02499 Cicer arietinum Ca_02499 I 0.847
Ca_09295 Cicer arietinum Ca_09295 I 0.840
Ca_12010 Cicer arietinum Ca_12010 I 0.872
Ca_14618 Cicer arietinum Ca_14618 I 0.822
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.843
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.847
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.773
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.802
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.842
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.797
Cla000716 Citrullus lanatus Cla000716 I 0.841
Cla018124 Citrullus lanatus Cla018124 I 0.839
Cla018549 Citrullus lanatus Cla018549 I 0.765
Cla020549 Citrullus lanatus Cla020549 I 0.777
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.830
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.770
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.841
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.839
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.846
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.805
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.863
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.847
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.865
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.780
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.841
F775_32962 Aegilops tauschii F775_32962 I 0.841
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.790
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.840
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.785
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.863
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.789
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.841
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.850
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.841
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.847
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.847
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.847
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.819
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.841
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.828
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.848
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.841
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.841
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.837
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.837
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.830
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.821
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.796
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.832
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.819
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.788
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.842
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.819
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.848
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.824
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.840
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.841
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.841
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.830
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.810
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.817
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.815
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.830
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.826
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.816
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.834
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.805
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.848
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.810
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.825
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.838
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.823
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.843
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.783
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.817
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.803
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.829
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.802
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.815
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.829
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.821
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.827
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.821
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.782
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.792
MDP0000137561 Malus domestica MDP0000137561 I 0.862
MDP0000163645 Malus domestica MDP0000163645 I 0.805
MDP0000181606 Malus domestica MDP0000181606 I 0.842
MDP0000200319 Malus domestica MDP0000200319 I 0.848
mgf005133m Mimulus guttatus mgf005133m I 0.805
mgf009315m Mimulus guttatus mgf009315m I 0.840
mgf010466m Mimulus guttatus mgf010466m I 0.805
mgf021945m Mimulus guttatus mgf021945m I 0.838
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.829
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.822
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.843
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.822
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.840
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.841
OB03G45870 Oryza brachyantha OB03G45870 I 0.808
OB06G29960 Oryza brachyantha OB06G29960 I 0.821
OBART07G08110 Oryza barthii OBART07G08110 I 0.823
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.816
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.832
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.821
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.823
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.823
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.783
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.816
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.832
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.821
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.823
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.823
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.816
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.832
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.821
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.816
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.832
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.847
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.822
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.823
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.802
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.847
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.797
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.832
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.847
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.823
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.816
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.832
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.821
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.823
OS03G0818800 Oryza sativa OS03G0818800 I 0.772
OS05G0121600 Oryza sativa OS05G0121600 I 0.847
OS07G0235800 Oryza sativa OS07G0235800 I 0.823
P93632_MAIZE Zea mays P93632_MAIZE D 0.796
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.819
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.791
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.847
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.847
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.819
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.807
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.798
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.819
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.847
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.841
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.839
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.864
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.847
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.829
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.848
PK02403.1 Cannabis sativa PK02403.1 I 0.841
PK07183.1 Cannabis sativa PK07183.1 I 0.846
PK14490.1 Cannabis sativa PK14490.1 I 0.689
Pm000974 Prunus mume Pm000974 I 0.842
Pm002492 Prunus mume Pm002492 I 0.848
Pm030172 Prunus mume Pm030172 I 0.863
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.832
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.843
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.841
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.815
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.679
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.848
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.863
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.848
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.828
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.840
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.821
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.843
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.848
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.841
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.820
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.819
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.819
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.832
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.796
Si006371m.g Setaria italica Si006371m.g I 0.688
Si012635m.g Setaria italica Si012635m.g I 0.832
Si025305m.g Setaria italica Si025305m.g I 0.847
Si029636m.g Setaria italica Si029636m.g I 0.819
Si036068m.g Setaria italica Si036068m.g I 0.819
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.836
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.841
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.840
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.806
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.842
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.689
TCM_000665 Theobroma cacao TCM_000665 I 0.837
TCM_022077 Theobroma cacao TCM_022077 I 0.848
TCM_042000 Theobroma cacao TCM_042000 I 0.841
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.802
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.824
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.695
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.841
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.841
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.841
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.694
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.847
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.841
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.848
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.826