MTR_7g117690 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_7g117690 T002947_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF023
M06560_2.00
Arabidopsis thaliana
DYCACCGACANHDNN

NNHDNTGTCGGTGRH
Dap-seq
OMalley et al.(2016)
AT1G01250_col_a
0.802 0.900
ERF023
M06561_2.00
Arabidopsis thaliana
HHNHHDHCACCGACA

TGTCGGTGDHDDNDD
Dap-seq
OMalley et al.(2016)
AT1G01250_colamp_a
0.802 0.900
estExt_fgenesh1_pg.C_4800009
M01639_2.00
Physcomitrella patens
MACCGACM

KGTCGGTK
PBM
Weirauch et al.(2014)
pTH8488
0.683 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH24686 AP2 26 77

Links

Other AP2 family TFs
Other Medicago truncatula TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pm018354 Prunus mume Pm018354 I 0.833
PRUPE_ppa026139mg Prunus persica PRUPE_ppa026139mg I 0.833
SapurV1A.0003s1030 Salix purpurea SapurV1A.0003s1030 I 0.829
gene19141-v1.0-hybrid Fragaria vesca gene19141-v1.0-hybrid I 0.829
PK15554.1 Cannabis sativa PK15554.1 I 0.829
chr1.LjT43L07.200.nd Lotus japonicus chr1.LjT43L07.200.nd I 0.829
POPTR_0014s09540 Populus trichocarpa POPTR_0014s09540 I 0.824
29742.m001400 Ricinus communis 29742.m001400 I 0.824
GLYMA19G44580 Glycine max GLYMA19G44580 I 0.819
Ciclev10022410m.g Citrus clementina Ciclev10022410m.g I 0.819
orange1.1g029627m.g Citrus sinensis orange1.1g029627m.g I 0.819
POPTR_0855s00200 Populus trichocarpa POPTR_0855s00200 I 0.816
POPTR_0002s17330 Populus trichocarpa POPTR_0002s17330 I 0.816
POPTR_0002s17320 Populus trichocarpa POPTR_0002s17320 I 0.816
SapurV1A.0013s0250 Salix purpurea SapurV1A.0013s0250 I 0.816
Gorai.008G126000 Gossypium raimondii Gorai.008G126000 I 0.815
TCM_005130 Theobroma cacao TCM_005130 I 0.815
GLYMA03G41910 Glycine max GLYMA03G41910 I 0.809
mgf020568m Mimulus guttatus mgf020568m I 0.808
GLYMA16G02680 Glycine max GLYMA16G02680 I 0.804
ERF023 Arabidopsis thaliana AT1G01250 D 0.802
Cagra.1968s0069 Capsella grandiflora Cagra.1968s0069 I 0.802
Carubv10010347m.g Capsella rubella Carubv10010347m.g I 0.802
fgenesh2_kg.1__103__AT1G01250.1 Arabidopsis lyrata fgenesh2_kg.1__103__AT1G01250.1 I 0.802
Ca_17638 Cicer arietinum Ca_17638 I 0.801
GLYMA07G06080 Glycine max GLYMA07G06080 I 0.800
Ca_01325 Cicer arietinum Ca_01325 I 0.799
Bra032630 Brassica rapa Bra032630 I 0.799
MTR_8g027465 Medicago truncatula MTR_8g027465 I 0.797
Bostr.5325s0047 Boechera stricta Bostr.5325s0047 I 0.796
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I 0.795
Gorai.007G109400 Gossypium raimondii Gorai.007G109400 I 0.791
Bra033274 Brassica rapa Bra033274 I 0.789
Bo5g002600 Brassica oleracea Bo5g002600 I 0.789
Thhalv10009402m.g Eutrema salsugineum Thhalv10009402m.g I 0.789
Bo8g117810 Brassica oleracea Bo8g117810 I 0.786
cassava43608.valid.m1 Manihot esculenta cassava43608.valid.m1 I 0.780
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I 0.750
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.684
estExt_fgenesh1_pg.C_4800009 Physcomitrella patens estExt_fgenesh1_pg.C_4800009 D 0.683
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.682
gw1.155.87.1 Physcomitrella patens gw1.155.87.1 I 0.680
PGSC0003DMG400007036 Solanum tuberosum PGSC0003DMG400007036 N 0.678
cassava32974.m1 Manihot esculenta cassava32974.m1 I 0.678