MTR_8g027465 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_8g027465 T002959_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF023
M06560_2.00
Arabidopsis thaliana
DYCACCGACANHDNN

NNHDNTGTCGGTGRH
Dap-seq
OMalley et al.(2016)
AT1G01250_col_a
0.809 0.920
ERF023
M06561_2.00
Arabidopsis thaliana
HHNHHDHCACCGACA

TGTCGGTGDHDDNDD
Dap-seq
OMalley et al.(2016)
AT1G01250_colamp_a
0.809 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH18632 AP2 37 88

Links

Other AP2 family TFs
Other Medicago truncatula TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I 0.737
fgenesh2_kg.1__103__AT1G01250.1 Arabidopsis lyrata fgenesh2_kg.1__103__AT1G01250.1 I 0.809
ERF023 Arabidopsis thaliana AT1G01250 D 0.809
Bostr.5325s0047 Boechera stricta Bostr.5325s0047 I 0.803
Bo5g002600 Brassica oleracea Bo5g002600 I 0.796
Bo8g117810 Brassica oleracea Bo8g117810 I 0.792
Bra032630 Brassica rapa Bra032630 I 0.805
Bra033274 Brassica rapa Bra033274 I 0.796
PK15554.1 Cannabis sativa PK15554.1 I 0.801
Cagra.1968s0069 Capsella grandiflora Cagra.1968s0069 I 0.809
Carubv10010347m.g Capsella rubella Carubv10010347m.g I 0.809
Ca_17638 Cicer arietinum Ca_17638 I 0.837
Ca_01325 Cicer arietinum Ca_01325 I 0.771
Ciclev10022410m.g Citrus clementina Ciclev10022410m.g I 0.791
orange1.1g029627m.g Citrus sinensis orange1.1g029627m.g I 0.791
Thhalv10009402m.g Eutrema salsugineum Thhalv10009402m.g I 0.796
gene19141-v1.0-hybrid Fragaria vesca gene19141-v1.0-hybrid I 0.801
GLYMA16G02680 Glycine max GLYMA16G02680 I 0.806
GLYMA07G06080 Glycine max GLYMA07G06080 I 0.819
GLYMA19G44580 Glycine max GLYMA19G44580 I 0.791
GLYMA03G41910 Glycine max GLYMA03G41910 I 0.782
Gorai.007G109400 Gossypium raimondii Gorai.007G109400 I 0.796
Gorai.008G126000 Gossypium raimondii Gorai.008G126000 I 0.788
chr1.LjT43L07.200.nd Lotus japonicus chr1.LjT43L07.200.nd I 0.801
cassava32974.m1 Manihot esculenta cassava32974.m1 I 0.701
cassava43608.valid.m1 Manihot esculenta cassava43608.valid.m1 I 0.799
MTR_7g117690 Medicago truncatula MTR_7g117690 I 0.797
mgf020568m Mimulus guttatus mgf020568m I 0.806
POPTR_0002s17330 Populus trichocarpa POPTR_0002s17330 I 0.789
POPTR_0014s09540 Populus trichocarpa POPTR_0014s09540 I 0.814
POPTR_0855s00200 Populus trichocarpa POPTR_0855s00200 I 0.789
POPTR_0002s17320 Populus trichocarpa POPTR_0002s17320 I 0.789
Pm018354 Prunus mume Pm018354 I 0.801
PRUPE_ppa026139mg Prunus persica PRUPE_ppa026139mg I 0.801
29742.m001400 Ricinus communis 29742.m001400 I 0.814
SapurV1A.0003s1030 Salix purpurea SapurV1A.0003s1030 I 0.801
SapurV1A.0013s0250 Salix purpurea SapurV1A.0013s0250 I 0.789
PGSC0003DMG400007036 Solanum tuberosum PGSC0003DMG400007036 N 0.679
TCM_005130 Theobroma cacao TCM_005130 I 0.788
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I 0.767