OB01G16440 (Oryza brachyantha)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OB01G16440 T002976_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8LKX0_MAIZE
M09722_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DBF2_01 		0.710 0.760
ERF035
M06631_2.00 		Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
AT3G60490_col_a 		0.682 0.760
ERF035
M06632_2.00 		Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a 		0.682 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB01G16440.1 AP2 59 110

Links

Other AP2 family TFs
Other Oryza brachyantha TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRAES3BF073700060CFD_g Triticum aestivum TRAES3BF073700060CFD_g I 0.766
BGIOSGA002184 Oryza indica BGIOSGA002184 I 0.763
ONIVA01G08000 Oryza nivara ONIVA01G08000 I 0.763
AC187157.4_FG001 Zea mays AC187157.4_FG001 I 0.758
ORUFI01G06970 Oryza rufipogon ORUFI01G06970 I 0.753
ORGLA01G0061000 Oryza glaberrima ORGLA01G0061000 I 0.753
OPUNC01G06210 Oryza punctata OPUNC01G06210 I 0.753
OMERI01G06530 Oryza meridionalis OMERI01G06530 I 0.753
OBART01G06440 Oryza barthii OBART01G06440 I 0.753
OS01G0200600 Oryza sativa OS01G0200600 I 0.753
OGLUM01G07430 Oryza glumaepatula OGLUM01G07430 I 0.753
Si002749m.g Setaria italica Si002749m.g I 0.753
Sb03g002630 Sorghum bicolor Sb03g002630 I 0.753
Pavir.Eb00249 Panicum virgatum Pavir.Eb00249 I 0.753
BRADI2G06180 Brachypodium distachyon BRADI2G06180 I 0.748
OBART02G09680 Oryza barthii OBART02G09680 I 0.733
GLYMA01G13410 Glycine max GLYMA01G13410 I 0.721
GRMZM2G005301 Zea mays GRMZM2G005301 I 0.717
OGLUM02G09810 Oryza glumaepatula OGLUM02G09810 I 0.716
OMERI02G10950 Oryza meridionalis OMERI02G10950 I 0.716
ORUFI02G09750 Oryza rufipogon ORUFI02G09750 I 0.716
Pavir.Ab00844 Panicum virgatum Pavir.Ab00844 I 0.716
Si018188m.g Setaria italica Si018188m.g I 0.716
ORGLA02G0087100 Oryza glaberrima ORGLA02G0087100 I 0.716
ONIVA02G10590 Oryza nivara ONIVA02G10590 I 0.716
OPUNC02G08670 Oryza punctata OPUNC02G08670 I 0.716
LPERR06G15020 Leersia perrieri LPERR06G15020 I 0.716
GSMUA_Achr10G14070_001 Musa acuminata GSMUA_Achr10G14070_001 I 0.716
GRMZM2G047918 Zea mays GRMZM2G047918 I 0.716
BRADI3G08790 Brachypodium distachyon BRADI3G08790 I 0.716
OPUNC06G16400 Oryza punctata OPUNC06G16400 I 0.715
GRMZM5G806839 Zea mays GRMZM5G806839 I 0.712
Cla023465 Citrullus lanatus Cla023465 I 0.711
OB04G27840 Oryza brachyantha OB04G27840 I 0.711
Q8LKX0_MAIZE Zea mays Q8LKX0_MAIZE D 0.710
Sb01g029065 Sorghum bicolor Sb01g029065 I 0.710
Pavir.Ia02208 Panicum virgatum Pavir.Ia02208 I 0.710
GRMZM5G889719 Zea mays GRMZM5G889719 I 0.710
Si039427m.g Setaria italica Si039427m.g I 0.710
Cucsa.312570 Cucumis sativus Cucsa.312570 I 0.709
Pavir.Da00839 Panicum virgatum Pavir.Da00839 I 0.709
MTR_7g046260 Medicago truncatula MTR_7g046260 I 0.708
GRMZM2G073047 Zea mays GRMZM2G073047 I 0.708
OB06G25840 Oryza brachyantha OB06G25840 I 0.708
ORUFI06G19350 Oryza rufipogon ORUFI06G19350 I 0.707
Traes_7DL_538583735 Triticum aestivum Traes_7DL_538583735 I 0.707
BRADI1G38110 Brachypodium distachyon BRADI1G38110 I 0.707
Si007144m.g Setaria italica Si007144m.g I 0.707
MLOC_17203 Hordeum vulgare MLOC_17203 I 0.707
F775_14820 Aegilops tauschii F775_14820 I 0.707
OMERI06G18780 Oryza meridionalis OMERI06G18780 I 0.707
ONIVA06G21640 Oryza nivara ONIVA06G21640 I 0.707
BRADI3G33355 Brachypodium distachyon BRADI3G33355 I 0.705
LPERR10G14320 Leersia perrieri LPERR10G14320 I 0.704
Traes_1AL_88D49649D Triticum aestivum Traes_1AL_88D49649D I 0.699
Traes_1BL_E39CD252E Triticum aestivum Traes_1BL_E39CD252E I 0.699
F775_11989 Aegilops tauschii F775_11989 I 0.699
OMERI08G00520 Oryza meridionalis OMERI08G00520 I 0.694
OGLUM10G18570 Oryza glumaepatula OGLUM10G18570 I 0.694
ONIVA10G21000 Oryza nivara ONIVA10G21000 I 0.694
OPUNC10G16830 Oryza punctata OPUNC10G16830 I 0.694
ORGLA10G0136200 Oryza glaberrima ORGLA10G0136200 I 0.694
Gorai.009G136500 Gossypium raimondii Gorai.009G136500 I 0.693
Cucsa.116550 Cucumis sativus Cucsa.116550 I 0.687
Cla017050 Citrullus lanatus Cla017050 I 0.687
GSMUA_Achr1G04350_001 Musa acuminata GSMUA_Achr1G04350_001 I 0.687
Pavir.Ga01094 Panicum virgatum Pavir.Ga01094 I 0.685
Cagra.3527s0003 Capsella grandiflora Cagra.3527s0003 I 0.685
GSMUA_Achr2G09430_001 Musa acuminata GSMUA_Achr2G09430_001 I 0.685
Carubv10017799m.g Capsella rubella Carubv10017799m.g I 0.685
Pavir.Ab02603 Panicum virgatum Pavir.Ab02603 I 0.684
Pavir.Aa00833 Panicum virgatum Pavir.Aa00833 I 0.684
GRMZM5G816314 Zea mays GRMZM5G816314 I 0.684
GRMZM2G041839 Zea mays GRMZM2G041839 I 0.684
Sb04g032940 Sorghum bicolor Sb04g032940 I 0.684
GRMZM2G072926 Zea mays GRMZM2G072926 I 0.684
GRMZM2G048621 Zea mays GRMZM2G048621 I 0.684
Si019772m.g Setaria italica Si019772m.g I 0.684
Si017865m.g Setaria italica Si017865m.g I 0.684
Cucsa.121080 Cucumis sativus Cucsa.121080 I 0.683
PGSC0003DMG400000365 Solanum tuberosum PGSC0003DMG400000365 I 0.682
GRMZM2G028969 Zea mays GRMZM2G028969 I 0.682
Solyc12g008350.1 Solanum lycopersicum Solyc12g008350.1 I 0.682
fgenesh2_kg.5__2513__AT3G60490.1 Arabidopsis lyrata fgenesh2_kg.5__2513__AT3G60490.1 I 0.682
ERF035 Arabidopsis thaliana AT3G60490 D 0.682
Bostr.13158s0050 Boechera stricta Bostr.13158s0050 I 0.681
Ciclev10009138m.g Citrus clementina Ciclev10009138m.g I 0.681
orange1.1g041119m.g Citrus sinensis orange1.1g041119m.g I 0.681
Gorai.004G281600 Gossypium raimondii Gorai.004G281600 I 0.680
TCM_014892 Theobroma cacao TCM_014892 I 0.678