OB03G21640 (Oryza brachyantha)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OB03G21640 T003001_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF014
M06581_2.00
Arabidopsis thaliana
YCDYCDCCACCGHCD

HGDCGGTGGHGRHGR
Dap-seq
OMalley et al.(2016)
AT1G44830_col_a
0.692 0.784
ERF012
M06570_2.00
Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC

GDCGGTGGHDDHDDNDNNDN
Dap-seq
OMalley et al.(2016)
DREB26_col_a
0.692 0.784
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB03G21640.1 AP2 46 97

Links

Other AP2 family TFs
Other Oryza brachyantha TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_20580 Aegilops tauschii F775_20580 I 0.690
F775_17148 Aegilops tauschii F775_17148 I 0.691
Aquca_014_00181 Aquilegia coerulea Aquca_014_00181 I 0.693
fgenesh2_kg.1__3777__AT1G44830.1 Arabidopsis lyrata fgenesh2_kg.1__3777__AT1G44830.1 I 0.692
DREB26 Arabidopsis lyrata fgenesh2_kg.1__2381__AT1G21910.1 I 0.692
ERF012 Arabidopsis thaliana AT1G21910 D 0.692
ERF014 Arabidopsis thaliana AT1G44830 D 0.692
Bostr.12659s0041 Boechera stricta Bostr.12659s0041 I 0.692
Bostr.12302s0095 Boechera stricta Bostr.12302s0095 I 0.692
BRADI1G67350 Brachypodium distachyon BRADI1G67350 I 0.744
BRADI3G57867 Brachypodium distachyon BRADI3G57867 I 0.691
BRADI1G46120 Brachypodium distachyon BRADI1G46120 I 0.689
Bo5g034880 Brassica oleracea Bo5g034880 I 0.691
Bo6g004620 Brassica oleracea Bo6g004620 I 0.692
Bo8g071150 Brassica oleracea Bo8g071150 I 0.692
Bo6g121400 Brassica oleracea Bo6g121400 I 0.700
Bra040309 Brassica rapa Bra040309 I 0.692
Bra012298 Brassica rapa Bra012298 I 0.699
Bra015660 Brassica rapa Bra015660 I 0.700
Bra016400 Brassica rapa Bra016400 I 0.692
Bra036022 Brassica rapa Bra036022 I 0.692
Cagra.1192s0001 Capsella grandiflora Cagra.1192s0001 I 0.692
Cagra.2306s0038 Capsella grandiflora Cagra.2306s0038 I 0.692
Carubv10010259m.g Capsella rubella Carubv10010259m.g I 0.692
Carubv10010179m.g Capsella rubella Carubv10010179m.g I 0.692
evm.TU.supercontig_36.41 Carica papaya evm.TU.supercontig_36.41 I 0.692
Ca_25824 Cicer arietinum Ca_25824 I 0.692
Cla014165 Citrullus lanatus Cla014165 I 0.692
Cla023512 Citrullus lanatus Cla023512 I 0.692
Ciclev10002294m.g Citrus clementina Ciclev10002294m.g I 0.698
orange1.1g039680m.g Citrus sinensis orange1.1g039680m.g I 0.698
Cucsa.365220 Cucumis sativus Cucsa.365220 I 0.692
Cucsa.372760 Cucumis sativus Cucsa.372760 I 0.692
Thhalv10008639m.g Eutrema salsugineum Thhalv10008639m.g I 0.692
Thhalv10011778m.g Eutrema salsugineum Thhalv10011778m.g I 0.692
Thhalv10019045m.g Eutrema salsugineum Thhalv10019045m.g I 0.700
gene11145-v1.0-hybrid Fragaria vesca gene11145-v1.0-hybrid I 0.692
GLYMA04G43040 Glycine max GLYMA04G43040 I 0.692
GLYMA14G22970 Glycine max GLYMA14G22970 I 0.692
GLYMA13G02860 Glycine max GLYMA13G02860 I 0.692
GLYMA06G11700 Glycine max GLYMA06G11700 I 0.692
Gorai.010G048900 Gossypium raimondii Gorai.010G048900 I 0.692
Gorai.009G244500 Gossypium raimondii Gorai.009G244500 I 0.692
Gorai.002G220900 Gossypium raimondii Gorai.002G220900 I 0.692
MLOC_70931 Hordeum vulgare MLOC_70931 I 0.689
LPERR02G27720 Leersia perrieri LPERR02G27720 I 0.700
LPERR06G06370 Leersia perrieri LPERR06G06370 I 0.693
LPERR03G10190 Leersia perrieri LPERR03G10190 I 0.769
Lus10028032.g Linum usitatissimum Lus10028032.g I 0.692
Lus10003740.g Linum usitatissimum Lus10003740.g I 0.692
MDP0000923690 Malus domestica MDP0000923690 I 0.692
MDP0000120147 Malus domestica MDP0000120147 I 0.692
cassava44357.m1 Manihot esculenta cassava44357.m1 I 0.688
cassava28944.valid.m1 Manihot esculenta cassava28944.valid.m1 I 0.692
MTR_5g058470 Medicago truncatula MTR_5g058470 I 0.692
MTR_3g072610 Medicago truncatula MTR_3g072610 I 0.692
mgf023290m Mimulus guttatus mgf023290m I 0.683
mgf021045m Mimulus guttatus mgf021045m I 0.692
GSMUA_Achr10G30100_001 Musa acuminata GSMUA_Achr10G30100_001 I 0.684
GSMUA_Achr8G23240_001 Musa acuminata GSMUA_Achr8G23240_001 I 0.692
GSMUA_Achr10G25270_001 Musa acuminata GSMUA_Achr10G25270_001 I 0.687
GSMUA_Achr10G19460_001 Musa acuminata GSMUA_Achr10G19460_001 I 0.704
OBART06G07000 Oryza barthii OBART06G07000 I 0.720
OBART03G11470 Oryza barthii OBART03G11470 I 0.769
ORGLA06G0065100 Oryza glaberrima ORGLA06G0065100 I 0.720
ORGLA03G0110800 Oryza glaberrima ORGLA03G0110800 I 0.769
OGLUM03G11430 Oryza glumaepatula OGLUM03G11430 I 0.769
OGLUM06G07380 Oryza glumaepatula OGLUM06G07380 I 0.720
OGLUM02G34320 Oryza glumaepatula OGLUM02G34320 I 0.693
BGIOSGA022531 Oryza indica BGIOSGA022531 I 0.720
BGIOSGA011061 Oryza indica BGIOSGA011061 I 0.769
BGIOSGA005542 Oryza indica BGIOSGA005542 I 0.693
OMERI03G10750 Oryza meridionalis OMERI03G10750 I 0.769
OMERI06G08130 Oryza meridionalis OMERI06G08130 I 0.720
OMERI02G32260 Oryza meridionalis OMERI02G32260 I 0.693
ONIVA06G08290 Oryza nivara ONIVA06G08290 I 0.720
ONIVA03G12660 Oryza nivara ONIVA03G12660 I 0.769
ONIVA02G33600 Oryza nivara ONIVA02G33600 I 0.693
OPUNC06G06600 Oryza punctata OPUNC06G06600 I 0.720
OPUNC03G11030 Oryza punctata OPUNC03G11030 I 0.769
OPUNC02G31280 Oryza punctata OPUNC02G31280 I 0.693
ORUFI03G11820 Oryza rufipogon ORUFI03G11820 I 0.769
OS02G0767800 Oryza sativa OS02G0767800 I 0.693
OS03G0263000 Oryza sativa OS03G0263000 I 0.769
Pavir.Ia03856 Panicum virgatum Pavir.Ia03856 I 0.740
Pavir.J02555 Panicum virgatum Pavir.J02555 I 0.693
Pavir.J23882 Panicum virgatum Pavir.J23882 I 0.690
Pavir.Ib01111 Panicum virgatum Pavir.Ib01111 I 0.740
Pavir.J26231 Panicum virgatum Pavir.J26231 I 0.690
POPTR_0002s08610 Populus trichocarpa POPTR_0002s08610 I 0.692
POPTR_0005s15830 Populus trichocarpa POPTR_0005s15830 I 0.686
Pm004870 Prunus mume Pm004870 I 0.692
PRUPE_ppa010649mg Prunus persica PRUPE_ppa010649mg I 0.692
29908.m006165 Ricinus communis 29908.m006165 I 0.692
SapurV1A.3198s0010 Salix purpurea SapurV1A.3198s0010 I 0.685
SapurV1A.0010s0960 Salix purpurea SapurV1A.0010s0960 I 0.692
SapurV1A.0105s0160 Salix purpurea SapurV1A.0105s0160 I 0.685
Si007977m.g Setaria italica Si007977m.g I 0.690
Si039170m.g Setaria italica Si039170m.g I 0.740
Solyc11g012980.1 Solanum lycopersicum Solyc11g012980.1 I 0.699
PGSC0003DMG400000910 Solanum tuberosum PGSC0003DMG400000910 I 0.699
Sb01g040280 Sorghum bicolor Sb01g040280 I 0.740
Sb10g006980 Sorghum bicolor Sb10g006980 I 0.684
Sb04g034290 Sorghum bicolor Sb04g034290 I 0.693
TCM_035077 Theobroma cacao TCM_035077 I 0.692
Traes_4AS_18663793B Triticum aestivum Traes_4AS_18663793B I 0.744
Traes_4BL_762F09E09 Triticum aestivum Traes_4BL_762F09E09 I 0.744
Traes_4DL_FB8B5AAEB Triticum aestivum Traes_4DL_FB8B5AAEB I 0.744
VIT_18s0001g03240 Vitis vinifera VIT_18s0001g03240 I 0.692
GRMZM2G021369 Zea mays GRMZM2G021369 I 0.722
GRMZM2G015281 Zea mays GRMZM2G015281 I 0.740
GRMZM2G011110 Zea mays GRMZM2G011110 I 0.693
GRMZM2G007406 Zea mays GRMZM2G007406 I 0.732