OB07G11390 (Oryza brachyantha)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OB07G11390 T003039_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q6SA75_TOBAC
M09733_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_01
0.880 0.930
Q6SA75_TOBAC
M09734_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_02
0.880 0.930
ANT
M02647_2.00
Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW

WDNRCHTBGGGAWNYGTGYNH
SELEX
Mathelier et al.(2014)
MA0571.1
0.846 0.870
ANT
M09705_2.00
Arabidopsis thaliana
CACRNWTCCCRAKG

CMTYGGGAWNYGTG
Transfac
Matys et al.(2006)
P$ANT_01
0.846 0.870
PLT1
M06622_2.00
Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN

NNDYCTYGRDWWNCGTGHH
Dap-seq
OMalley et al.(2016)
PLT1_col_a
0.840 0.860
PLT1
M06623_2.00
Arabidopsis thaliana
DYDCRNWTYYCRAG

CTYGRRAWNYGHRH
Dap-seq
OMalley et al.(2016)
PLT1_colamp_a
0.840 0.860
AIL7
M06688_2.00
Arabidopsis thaliana
CRNWTHYCRAG

CTYGRDAWNYG
Dap-seq
OMalley et al.(2016)
AIL7_col_a
0.767 0.790
AIL7
M06689_2.00
Arabidopsis thaliana
DCRNWTHYCRAG

CTYGRDAWNYGH
Dap-seq
OMalley et al.(2016)
AIL7_colamp_a
0.767 0.790
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB07G11390.1 AP2 260 314
OB07G11390.1 AP2 356 408

Links

Other AP2 family TFs
Other Oryza brachyantha TFs

Invalid Input OrderBy

563 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action