OBART02G27750 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART02G27750 T003091_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G63040
M06590_2.00
Arabidopsis thaliana
TTGAAA

TTTCAA
Dap-seq
OMalley et al.(2016)
AT1G63040_col_a
0.681 0.833
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART02G27750.1 AP2 70 119

Links

Other AP2 family TFs
Other Oryza barthii TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT1G63040 Arabidopsis thaliana AT1G63040 D 0.681
BGIOSGA008802 Oryza indica BGIOSGA008802 I 0.766
BGIOSGA016949 Oryza indica BGIOSGA016949 N 0.682
Bo9g028820 Brassica oleracea Bo9g028820 I 0.677
BRADI3G51610 Brachypodium distachyon BRADI3G51610 N 0.725
Cagra.0568s0175 Capsella grandiflora Cagra.0568s0175 I 0.678
Cagra.6357s0007 Capsella grandiflora Cagra.6357s0007 I 0.684
Carubv10012147m.g Capsella rubella Carubv10012147m.g I 0.683
Carubv10022214m.g Capsella rubella Carubv10022214m.g I 0.684
Cla011673 Citrullus lanatus Cla011673 I 0.682
Cucsa.302760 Cucumis sativus Cucsa.302760 I 0.677
fgenesh1_pm.C_scaffold_1001063 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001063 I 0.677
Gorai.003G162600 Gossypium raimondii Gorai.003G162600 I 0.709
GRMZM2G000520 Zea mays GRMZM2G000520 I 0.766
GRMZM2G434203 Zea mays GRMZM2G434203 I 0.744
LPERR02G22600 Leersia perrieri LPERR02G22600 I 0.766
LPERR04G18180 Leersia perrieri LPERR04G18180 N 0.683
MLOC_62554 Hordeum vulgare MLOC_62554 N 0.727
OBART04G22210 Oryza barthii OBART04G22210 N 0.682
OGLUM02G28310 Oryza glumaepatula OGLUM02G28310 I 0.766
OGLUM04G22250 Oryza glumaepatula OGLUM04G22250 N 0.682
OMERI02G26970 Oryza meridionalis OMERI02G26970 I 0.766
OMERI04G18760 Oryza meridionalis OMERI04G18760 N 0.682
ONIVA02G30630 Oryza nivara ONIVA02G30630 I 0.766
ONIVA04G20830 Oryza nivara ONIVA04G20830 N 0.682
OPUNC02G25450 Oryza punctata OPUNC02G25450 I 0.766
ORUFI02G29210 Oryza rufipogon ORUFI02G29210 I 0.766
ORUFI04G23880 Oryza rufipogon ORUFI04G23880 N 0.682
OS02G0676800 Oryza sativa OS02G0676800 I 0.766
OS04G0572200 Oryza sativa OS04G0572200 N 0.682
Pavir.Ab02683 Panicum virgatum Pavir.Ab02683 I 0.766
PGSC0003DMG400022759 Solanum tuberosum PGSC0003DMG400022759 I 0.682
Sb04g031960 Sorghum bicolor Sb04g031960 I 0.766
scaffold_101390.1 Arabidopsis lyrata scaffold_101390.1 I 0.677
Si018039m.g Setaria italica Si018039m.g I 0.766
Solyc08g080290.2 Solanum lycopersicum Solyc08g080290.2 I 0.682
TCM_016176 Theobroma cacao TCM_016176 I 0.684
Thhalv10009659m.g Eutrema salsugineum Thhalv10009659m.g I 0.683
Traes_6DL_FD6D63D1A Triticum aestivum Traes_6DL_FD6D63D1A N 0.727