CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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OBART04G27840
(
Oryza barthii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OBART04G27840
T003122_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART04G27840.1
AP2
25
77
SIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTEEEAAEAYDIAAIKFRGL
Links
Other
AP2
family TFs
Other
Oryza barthii
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA023403
Oryza indica
BGIOSGA023403
N
0.912
PDK_20s1310831g003
Phoenix dactylifera
PDK_20s1310831g003
N
0.912
Traes_3AL_7ECC5258D
Triticum aestivum
Traes_3AL_7ECC5258D
N
0.912
Traes_7AL_C5F8733D0
Triticum aestivum
Traes_7AL_C5F8733D0
N
0.912
Traes_7DL_FBE71A7AE
Triticum aestivum
Traes_7DL_FBE71A7AE
N
0.912
Traes_7BL_9FED7F55E
Triticum aestivum
Traes_7BL_9FED7F55E
N
0.912
OB01G49350
Oryza brachyantha
OB01G49350
N
0.912
ORUFI06G25070
Oryza rufipogon
ORUFI06G25070
N
0.912
MLOC_51604
Hordeum vulgare
MLOC_51604
N
0.912
Lus10015653.g
Linum usitatissimum
Lus10015653.g
N
0.907
Thhalv10011985m.g
Eutrema salsugineum
Thhalv10011985m.g
N
0.904
29562.m000029
Ricinus communis
29562.m000029
N
0.903
Gorai.004G263900
Gossypium raimondii
Gorai.004G263900
I
0.903
Gorai.001G140000
Gossypium raimondii
Gorai.001G140000
I
0.903
MLOC_10221
Hordeum vulgare
MLOC_10221
I
0.903
OB03G24880
Oryza brachyantha
OB03G24880
N
0.901
OLONG_000238
Oryza longistaminata
OLONG_000238
N
0.898
30170.m013668
Ricinus communis
30170.m013668
N
0.898
Lus10011731.g
Linum usitatissimum
Lus10011731.g
N
0.897
LjSGA_007141.1
Lotus japonicus
LjSGA_007141.1
N
0.896
PGSC0003DMG401009171
Solanum tuberosum
PGSC0003DMG401009171
N
0.896
Traes_4AS_A1A963CC4
Triticum aestivum
Traes_4AS_A1A963CC4
N
0.894
Traes_4BL_21E038CCB
Triticum aestivum
Traes_4BL_21E038CCB
N
0.894
ONIVA04G16290
Oryza nivara
ONIVA04G16290
N
0.890
OBART04G17940
Oryza barthii
OBART04G17940
N
0.890
OS02G0614300
Oryza sativa
OS02G0614300
N
0.890
MLOC_70927
Hordeum vulgare
MLOC_70927
N
0.890
VIT_04s0023g00970
Vitis vinifera
VIT_04s0023g00970
N
0.870
GRMZM2G028151
Zea mays
GRMZM2G028151
I
0.846
MDP0000825712
Malus domestica
MDP0000825712
N
0.837
GLYMA18G29400
Glycine max
GLYMA18G29400
I
0.837
GRMZM2G008234
Zea mays
GRMZM2G008234
N
0.837
LjSGA_008808.1
Lotus japonicus
LjSGA_008808.1
N
0.836
MLOC_70754
Hordeum vulgare
MLOC_70754
I
0.829
GRMZM2G021573
Zea mays
GRMZM2G021573
I
0.823
TCM_025083
Theobroma cacao
TCM_025083
N
0.803
PGSC0003DMG400014598
Solanum tuberosum
PGSC0003DMG400014598
N
0.776
Traes_3DL_83B339561
Triticum aestivum
Traes_3DL_83B339561
N
0.690
OLONG_004616
Oryza longistaminata
OLONG_004616
N
0.686