OBART06G23380 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART06G23380 T003148_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART06G23380.1 AP2 129 186

Links

Other AP2 family TFs
Other Oryza barthii TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_10869 Aegilops tauschii F775_10869 N 0.724
AMTR_s00159p00062070 Amborella trichopoda AMTR_s00159p00062070 N 0.751
Aquca_009_00241 Aquilegia coerulea Aquca_009_00241 N 0.740
fgenesh2_kg.4__2311__AT2G41710.2 Arabidopsis lyrata fgenesh2_kg.4__2311__AT2G41710.2 N 0.720
AT2G41710 Arabidopsis thaliana AT2G41710 N 0.720
Bostr.11568s0008 Boechera stricta Bostr.11568s0008 N 0.732
BRADI3G59300 Brachypodium distachyon BRADI3G59300 N 0.714
BRADI2G26987 Brachypodium distachyon BRADI2G26987 N 0.724
Bo3g035770 Brassica oleracea Bo3g035770 N 0.732
Bo4g013420 Brassica oleracea Bo4g013420 N 0.720
Bra023921 Brassica rapa Bra023921 N 0.757
Bra004641 Brassica rapa Bra004641 N 0.720
PK15670.1 Cannabis sativa PK15670.1 N 0.836
PK18855.1 Cannabis sativa PK18855.1 N 0.725
PK12273.1 Cannabis sativa PK12273.1 N 0.720
Cagra.0914s0005 Capsella grandiflora Cagra.0914s0005 N 0.720
Carubv10023272m.g Capsella rubella Carubv10023272m.g N 0.732
evm.TU.supercontig_129.70 Carica papaya evm.TU.supercontig_129.70 N 0.821
evm.TU.supercontig_224.4 Carica papaya evm.TU.supercontig_224.4 N 0.720
evm.TU.supercontig_99.39 Carica papaya evm.TU.supercontig_99.39 N 0.937
Ca_07237 Cicer arietinum Ca_07237 N 0.720
Cla022214 Citrullus lanatus Cla022214 N 0.702
Ciclev10005012m.g Citrus clementina Ciclev10005012m.g N 0.720
orange1.1g018292m.g Citrus sinensis orange1.1g018292m.g N 0.720
Cucsa.353040 Cucumis sativus Cucsa.353040 I 0.783
Cucsa.338170 Cucumis sativus Cucsa.338170 N 0.728
Eucgr.A02341 Eucalyptus grandis Eucgr.A02341 N 0.720
Thhalv10016812m.g Eutrema salsugineum Thhalv10016812m.g N 0.720
gene02470-v1.0-hybrid Fragaria vesca gene02470-v1.0-hybrid N 0.732
GLYMA19G31960 Glycine max GLYMA19G31960 N 0.720
GLYMA03G29240 Glycine max GLYMA03G29240 N 0.720
GLYMA02G33090 Glycine max GLYMA02G33090 N 0.713
Gorai.003G091500 Gossypium raimondii Gorai.003G091500 N 0.720
MLOC_7325 Hordeum vulgare MLOC_7325 N 0.712
LPERR05G11930 Leersia perrieri LPERR05G11930 N 0.724
Lus10000965.g Linum usitatissimum Lus10000965.g N 0.732
Lus10011730.g Linum usitatissimum Lus10011730.g N 0.814
Lus10039650.g Linum usitatissimum Lus10039650.g N 0.814
Lus10040140.g Linum usitatissimum Lus10040140.g N 0.732
LjSGA_012098.1 Lotus japonicus LjSGA_012098.1 N 0.715
chr3.CM0452.130.nd Lotus japonicus chr3.CM0452.130.nd N 0.722
MDP0000803527 Malus domestica MDP0000803527 N 0.727
MDP0000314518 Malus domestica MDP0000314518 N 0.732
cassava40681.m1 Manihot esculenta cassava40681.m1 N 0.684
cassava421.valid.m1 Manihot esculenta cassava421.valid.m1 N 0.732
cassava19560.m1 Manihot esculenta cassava19560.m1 N 0.733
MTR_7g091390 Medicago truncatula MTR_7g091390 N 0.732
mgf019897m Mimulus guttatus mgf019897m N 0.739
mgf017600m Mimulus guttatus mgf017600m N 0.738
OBART05G15060 Oryza barthii OBART05G15060 N 0.724
OB03G42600 Oryza brachyantha OB03G42600 N 0.825
OB05G22940 Oryza brachyantha OB05G22940 N 0.724
OB06G31060 Oryza brachyantha OB06G31060 N 0.946
ORGLA05G0129100 Oryza glaberrima ORGLA05G0129100 N 0.712
OGLUM05G15890 Oryza glumaepatula OGLUM05G15890 N 0.724
BGIOSGA019793 Oryza indica BGIOSGA019793 N 0.724
BGIOSGA023402 Oryza indica BGIOSGA023402 N 0.946
OLONG_002212 Oryza longistaminata OLONG_002212 N 0.946
OLONG_020459 Oryza longistaminata OLONG_020459 N 0.724
OMERI06G23370 Oryza meridionalis OMERI06G23370 N 0.946
OMERI05G13370 Oryza meridionalis OMERI05G13370 N 0.724
ONIVA05G15390 Oryza nivara ONIVA05G15390 N 0.724
OPUNC05G13110 Oryza punctata OPUNC05G13110 N 0.724
ORUFI05G16140 Oryza rufipogon ORUFI05G16140 N 0.724
Pavir.Cb01456 Panicum virgatum Pavir.Cb01456 N 0.712
Pavir.Ca01410 Panicum virgatum Pavir.Ca01410 N 0.712
PDK_20s1310831g004 Phoenix dactylifera PDK_20s1310831g004 N 0.864
POPTR_0006s04820 Populus trichocarpa POPTR_0006s04820 N 0.732
POPTR_0016s05670 Populus trichocarpa POPTR_0016s05670 N 0.732
PRUPE_ppa006202mg Prunus persica PRUPE_ppa006202mg N 0.732
30170.m013669 Ricinus communis 30170.m013669 N 0.791
30006.m000282 Ricinus communis 30006.m000282 N 0.732
SapurV1A.3066s0020 Salix purpurea SapurV1A.3066s0020 N 0.720
SapurV1A.0037s0030 Salix purpurea SapurV1A.0037s0030 N 0.726
Si021952m.g Setaria italica Si021952m.g N 0.712
Sb09g019190 Sorghum bicolor Sb09g019190 N 0.724
TCM_024554 Theobroma cacao TCM_024554 N 0.720
Traes_6AS_53FA034C9 Triticum aestivum Traes_6AS_53FA034C9 N 0.681
TRIUR3_07433 Triticum urartu TRIUR3_07433 N 0.724
VIT_08s0007g08580 Vitis vinifera VIT_08s0007g08580 N 0.732
BBM Vitis vinifera VIT_04s0023g00950 N 0.937
GRMZM2G146688 Zea mays GRMZM2G146688 N 0.791
GRMZM2G013657 Zea mays GRMZM2G013657 N 0.724