OBART07G11330 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART07G11330 T003154_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD

HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.696 0.694
Q5Y836_TOBAC
M09732_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF5_02
0.690 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART07G11330.1 AP2 74 126

Links

Other AP2 family TFs
Other Oryza barthii TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ERF094 Arabidopsis thaliana AT1G06160 D 0.696
Q5Y836_TOBAC Nicotiana tabacum Q5Y836_TOBAC D 0.690
Gorai.001G253100 Gossypium raimondii Gorai.001G253100 I 0.701
cassava47179.m1 Manihot esculenta cassava47179.m1 I 0.708
cassava38166.valid.m1 Manihot esculenta cassava38166.valid.m1 I 0.708
cassava37347.valid.m1 Manihot esculenta cassava37347.valid.m1 I 0.708
cassava22677.valid.m1 Manihot esculenta cassava22677.valid.m1 I 0.709
29680.m001678 Ricinus communis 29680.m001678 I 0.718
29584.m000234 Ricinus communis 29584.m000234 I 0.708
Ca_12221 Cicer arietinum Ca_12221 I 0.678
Ca_12081 Cicer arietinum Ca_12081 I 0.683
Cucsa.062330 Cucumis sativus Cucsa.062330 I 0.689
e_gw1.60.113.1 Physcomitrella patens e_gw1.60.113.1 I 0.681
Gorai.001G252600 Gossypium raimondii Gorai.001G252600 I 0.681
Gorai.001G176800 Gossypium raimondii Gorai.001G176800 I 0.704
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.696
Eucgr.K03266 Eucalyptus grandis Eucgr.K03266 I 0.692
Eucgr.H03088 Eucalyptus grandis Eucgr.H03088 I 0.688
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.695
Ciclev10021622m.g Citrus clementina Ciclev10021622m.g I 0.689
mgf022372m Mimulus guttatus mgf022372m I 0.677
mgf018693m Mimulus guttatus mgf018693m I 0.694
Ca_07754 Cicer arietinum Ca_07754 I 0.714
VIT_14s0081g00730 Vitis vinifera VIT_14s0081g00730 I 0.718
VIT_07s0005g03260 Vitis vinifera VIT_07s0005g03260 I 0.684
Traes_2BL_0B09B840B Triticum aestivum Traes_2BL_0B09B840B I 0.702
TCM_026234 Theobroma cacao TCM_026234 I 0.729
TCM_026233 Theobroma cacao TCM_026233 I 0.709
TCM_004056 Theobroma cacao TCM_004056 I 0.704
TCM_004052 Theobroma cacao TCM_004052 I 0.703
Solyc11g011740.1 Solanum lycopersicum Solyc11g011740.1 I 0.690
Si038911m.g Setaria italica Si038911m.g I 0.707
Si033089m.g Setaria italica Si033089m.g I 0.723
Si032815m.g Setaria italica Si032815m.g I 0.703
Traes_2BS_0EE99D4A6 Triticum aestivum Traes_2BS_0EE99D4A6 I 0.709
Traes_4AL_1A0E673DC Triticum aestivum Traes_4AL_1A0E673DC I 0.725
VIT_07s0005g03230 Vitis vinifera VIT_07s0005g03230 I 0.684
TRIUR3_16508 Triticum urartu TRIUR3_16508 I 0.738
Traes_5DL_53D8DF9CD Triticum aestivum Traes_5DL_53D8DF9CD I 0.721
Traes_5BL_4E044468C Triticum aestivum Traes_5BL_4E044468C I 0.721
Traes_4DS_9C01B536B Triticum aestivum Traes_4DS_9C01B536B I 0.702
Traes_4DL_CB92B5ABB Triticum aestivum Traes_4DL_CB92B5ABB I 0.720
Traes_4BL_39AE2989D Triticum aestivum Traes_4BL_39AE2989D I 0.721
Traes_4AS_9450AD3F4 Triticum aestivum Traes_4AS_9450AD3F4 I 0.738
Traes_4AL_5E86DF14B Triticum aestivum Traes_4AL_5E86DF14B I 0.725
Si031946m.g Setaria italica Si031946m.g I 0.702
LjSGA_017232.1 Lotus japonicus LjSGA_017232.1 I 0.715
Pavir.J16149 Panicum virgatum Pavir.J16149 I 0.699
Pavir.J02630 Panicum virgatum Pavir.J02630 I 0.712
Pavir.J01078 Panicum virgatum Pavir.J01078 I 0.711
Pavir.Ib03413 Panicum virgatum Pavir.Ib03413 I 0.708
Pavir.Ia00066 Panicum virgatum Pavir.Ia00066 I 0.691
Pavir.Hb01336 Panicum virgatum Pavir.Hb01336 I 0.735
Pavir.Hb01074 Panicum virgatum Pavir.Hb01074 I 0.731
Pavir.Ha01264 Panicum virgatum Pavir.Ha01264 I 0.735
Pavir.Ha01200 Panicum virgatum Pavir.Ha01200 I 0.723
Pavir.J28684 Panicum virgatum Pavir.J28684 I 0.726
Pavir.J30299 Panicum virgatum Pavir.J30299 I 0.723
chr5.CM0341.90.nc Lotus japonicus chr5.CM0341.90.nc I 0.682
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I 0.732
SapurV1A.3984s0010 Salix purpurea SapurV1A.3984s0010 I 0.696
SapurV1A.0233s0370 Salix purpurea SapurV1A.0233s0370 I 0.687
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I 0.732
SapurV1A.0132s0310 Salix purpurea SapurV1A.0132s0310 I 0.698
SapurV1A.0006s0850 Salix purpurea SapurV1A.0006s0850 I 0.689
SapurV1A.0006s0840 Salix purpurea SapurV1A.0006s0840 I 0.696
Pavir.J37124 Panicum virgatum Pavir.J37124 I 0.708
Pavir.Ha00307 Panicum virgatum Pavir.Ha00307 I 0.712
Pavir.Ha00304 Panicum virgatum Pavir.Ha00304 I 0.680
Pavir.Bb00962 Panicum virgatum Pavir.Bb00962 I 0.732
Lus10022935.g Linum usitatissimum Lus10022935.g I 0.724
Lus10022015.g Linum usitatissimum Lus10022015.g I 0.719
Gorai.013G186800 Gossypium raimondii Gorai.013G186800 I 0.703
Gorai.013G186700 Gossypium raimondii Gorai.013G186700 I 0.719
Gorai.007G281000 Gossypium raimondii Gorai.007G281000 I 0.709
Gorai.007G280900 Gossypium raimondii Gorai.007G280900 I 0.696
Gorai.007G280800 Gossypium raimondii Gorai.007G280800 I 0.696
Gorai.007G145800 Gossypium raimondii Gorai.007G145800 I 0.709
Gorai.005G049300 Gossypium raimondii Gorai.005G049300 I 0.682
Lus10042557.g Linum usitatissimum Lus10042557.g I 0.719
MDP0000246808 Malus domestica MDP0000246808 I 0.679
Pavir.Bb00653 Panicum virgatum Pavir.Bb00653 I 0.694
Pavir.Bb00652 Panicum virgatum Pavir.Bb00652 I 0.700
Pavir.Ba03491 Panicum virgatum Pavir.Ba03491 I 0.726
Pavir.Ba02781 Panicum virgatum Pavir.Ba02781 I 0.702
Pavir.Ba02374 Panicum virgatum Pavir.Ba02374 I 0.731
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.695
orange1.1g042174m.g Citrus sinensis orange1.1g042174m.g I 0.689
MDP0000447570 Malus domestica MDP0000447570 I 0.679
MDP0000322279 Malus domestica MDP0000322279 I 0.718
Gorai.004G057000 Gossypium raimondii Gorai.004G057000 I 0.711
OB09G27130 Oryza brachyantha OB09G27130 I 0.712
GSMUA_Achr4G12060_001 Musa acuminata GSMUA_Achr4G12060_001 I 0.688
GSMUA_Achr4G05520_001 Musa acuminata GSMUA_Achr4G05520_001 I 0.686
GSMUA_Achr2G17810_001 Musa acuminata GSMUA_Achr2G17810_001 I 0.681
GSMUA_Achr11G22020_001 Musa acuminata GSMUA_Achr11G22020_001 I 0.689
GRMZM5G837876 Zea mays GRMZM5G837876 I 0.743
GRMZM2G478965 Zea mays GRMZM2G478965 I 0.707
GRMZM2G381441 Zea mays GRMZM2G381441 I 0.695
GRMZM2G379652 Zea mays GRMZM2G379652 I 0.706
GRMZM2G123119 Zea mays GRMZM2G123119 I 0.707
GSMUA_Achr5G19610_001 Musa acuminata GSMUA_Achr5G19610_001 I 0.689
GSMUA_AchrUn_randomG10760_001 Musa acuminata GSMUA_AchrUn_randomG10760_001 I 0.706
MTR_1g074370 Medicago truncatula MTR_1g074370 I 0.683
MTR_1g069945 Medicago truncatula MTR_1g069945 I 0.714
MTR_1g069940 Medicago truncatula MTR_1g069940 I 0.701
MLOC_80197 Hordeum vulgare MLOC_80197 I 0.702
MLOC_77420 Hordeum vulgare MLOC_77420 I 0.721
MLOC_43207 Hordeum vulgare MLOC_43207 I 0.738
LPERR09G16380 Leersia perrieri LPERR09G16380 I 0.706
LPERR07G06830 Leersia perrieri LPERR07G06830 I 0.733
LPERR05G14610 Leersia perrieri LPERR05G14610 I 0.679
GRMZM2G073258 Zea mays GRMZM2G073258 I 0.743
GLYMA19G43815 Glycine max GLYMA19G43815 I 0.703
GLYMA19G34696 Glycine max GLYMA19G34696 I 0.719
F775_22020 Aegilops tauschii F775_22020 I 0.725
BRADI4G38930 Brachypodium distachyon BRADI4G38930 I 0.738
BRADI1G00670 Brachypodium distachyon BRADI1G00670 I 0.706
Bra030095 Brassica rapa Bra030095 I 0.679
Bra028703 Brassica rapa Bra028703 I 0.683
Bo7g048170 Brassica oleracea Bo7g048170 I 0.679
BGIOSGA031313 Oryza indica BGIOSGA031313 I 0.706
BGIOSGA024429 Oryza indica BGIOSGA024429 I 0.811
BGIOSGA024428 Oryza indica BGIOSGA024428 I 0.738
F775_22331 Aegilops tauschii F775_22331 I 0.720
F775_25471 Aegilops tauschii F775_25471 I 0.702
GLYMA13G18410 Glycine max GLYMA13G18410 I 0.715
GLYMA13G18390 Glycine max GLYMA13G18390 I 0.710
GLYMA13G18370 Glycine max GLYMA13G18370 I 0.719
GLYMA13G18350 Glycine max GLYMA13G18350 I 0.710
GLYMA13G18340 Glycine max GLYMA13G18340 I 0.728
GLYMA10G04210 Glycine max GLYMA10G04210 I 0.715
GLYMA10G04170 Glycine max GLYMA10G04170 I 0.734
GLYMA03G31940 Glycine max GLYMA03G31940 I 0.720
F775_52314 Aegilops tauschii F775_52314 I 0.721
AC233933.1_FG001 Zea mays AC233933.1_FG001 I 0.733
OBART05G18540 Oryza barthii OBART05G18540 I 0.688
Si028135m.g Setaria italica Si028135m.g I 0.711
POPTR_0010s08300 Populus trichocarpa POPTR_0010s08300 I 0.685
POPTR_0005s24470 Populus trichocarpa POPTR_0005s24470 I 0.687
POPTR_0005s24460 Populus trichocarpa POPTR_0005s24460 I 0.687
POPTR_0002s04020 Populus trichocarpa POPTR_0002s04020 I 0.689
POPTR_0002s04010 Populus trichocarpa POPTR_0002s04010 I 0.706
PGSC0003DMG400013255 Solanum tuberosum PGSC0003DMG400013255 I 0.690
OS09G0572000 Oryza sativa OS09G0572000 I 0.706
OS07G0410700 Oryza sativa OS07G0410700 I 0.738
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.696
ORUFI09G22040 Oryza rufipogon ORUFI09G22040 I 0.706
Sb01g000352 Sorghum bicolor Sb01g000352 I 0.700
Si028088m.g Setaria italica Si028088m.g I 0.709
Si027485m.g Setaria italica Si027485m.g I 0.736
Sb05g026843 Sorghum bicolor Sb05g026843 I 0.685
Sb05g022110 Sorghum bicolor Sb05g022110 I 0.701
Sb02g012630 Sorghum bicolor Sb02g012630 I 0.706
Sb02g005840 Sorghum bicolor Sb02g005840 I 0.727
Sb02g005810 Sorghum bicolor Sb02g005810 I 0.727
Si028219m.g Setaria italica Si028219m.g I 0.711
ORUFI07G11590 Oryza rufipogon ORUFI07G11590 I 0.738
ORUFI07G11580 Oryza rufipogon ORUFI07G11580 I 0.811
ONIVA07G09500 Oryza nivara ONIVA07G09500 I 0.738
OGLUM05G19620 Oryza glumaepatula OGLUM05G19620 I 0.688
ONIVA05G19500 Oryza nivara ONIVA05G19500 I 0.688
ONIVA01G50300 Oryza nivara ONIVA01G50300 I 0.811
OGLUM07G10870 Oryza glumaepatula OGLUM07G10870 I 0.786
OMERI05G16180 Oryza meridionalis OMERI05G16180 I 0.688
OLONG_005597 Oryza longistaminata OLONG_005597 I 0.706
OGLUM09G21150 Oryza glumaepatula OGLUM09G21150 I 0.706
OBART09G20410 Oryza barthii OBART09G20410 I 0.706
ONIVA09G20840 Oryza nivara ONIVA09G20840 I 0.706
OPUNC03G38860 Oryza punctata OPUNC03G38860 I 0.704
OBART07G11340 Oryza barthii OBART07G11340 I 0.738
ORUFI05G19730 Oryza rufipogon ORUFI05G19730 I 0.688
ORGLA07G0097100 Oryza glaberrima ORGLA07G0097100 I 0.738
ORGLA07G0097000 Oryza glaberrima ORGLA07G0097000 I 0.811
ORGLA05G0161000 Oryza glaberrima ORGLA05G0161000 I 0.688
OPUNC09G18690 Oryza punctata OPUNC09G18690 I 0.712
OPUNC07G10310 Oryza punctata OPUNC07G10310 I 0.736
OPUNC05G16280 Oryza punctata OPUNC05G16280 I 0.688
OGLUM07G10880 Oryza glumaepatula OGLUM07G10880 I 0.738
F775_01237 Aegilops tauschii F775_01237 N 0.702
F775_22648 Aegilops tauschii F775_22648 N 0.690
Traes_2BL_3A3353970 Triticum aestivum Traes_2BL_3A3353970 N 0.679
Traes_2BL_304012B04 Triticum aestivum Traes_2BL_304012B04 N 0.679
Traes_2AL_9E90C2488 Triticum aestivum Traes_2AL_9E90C2488 N 0.678