OBART07G11330 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART07G11330 T003154_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD

HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.696 0.694
Q5Y836_TOBAC
M09732_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF5_02
0.690 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART07G11330.1 AP2 74 126

Links

Other AP2 family TFs
Other Oryza barthii TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANAC011 Arabidopsis thaliana AT1G32510 D 0.000
ANAC011 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002601 I 0.000
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.000
BGIOSGA034823 Oryza indica BGIOSGA034823 N 0.000
Bo8g028730 Brassica oleracea Bo8g028730 I 0.000
Bo9g024360 Brassica oleracea Bo9g024360 N 0.000
Bostr.3359s0109 Boechera stricta Bostr.3359s0109 I 0.000
Bra035488 Brassica rapa Bra035488 I 0.000
Bra037283 Brassica rapa Bra037283 N 0.000
BRADI3G13630 Brachypodium distachyon BRADI3G13630 N 0.000
Cagra.7865s0013 Capsella grandiflora Cagra.7865s0013 I 0.000
Carubv10011108m.g Capsella rubella Carubv10011108m.g I 0.000
Cla007018 Citrullus lanatus Cla007018 N 0.000
Cla023594 Citrullus lanatus Cla023594 I 0.000
Cucsa.119310 Cucumis sativus Cucsa.119310 N 0.000
Cucsa.319840 Cucumis sativus Cucsa.319840 I 0.000
F775_11764 Aegilops tauschii F775_11764 I 0.000
Gorai.010G171100 Gossypium raimondii Gorai.010G171100 I 0.000
GSMUA_Achr10G08120_001 Musa acuminata GSMUA_Achr10G08120_001 I 0.000
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.000
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N 0.000
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.000
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.000
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N 0.000
mgf020234m Mimulus guttatus mgf020234m N 0.000
MLOC_37364 Hordeum vulgare MLOC_37364 I 0.000
OB09G25590 Oryza brachyantha OB09G25590 I 0.000
OBART11G03530 Oryza barthii OBART11G03530 N 0.000
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.000
OGLUM11G03170 Oryza glumaepatula OGLUM11G03170 N 0.000
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.000
OMERI11G03230 Oryza meridionalis OMERI11G03230 N 0.000
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.000
ONIVA11G03690 Oryza nivara ONIVA11G03690 N 0.000
OPUNC11G03220 Oryza punctata OPUNC11G03220 N 0.000
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.000
ORGLA11G0032800 Oryza glaberrima ORGLA11G0032800 N 0.000
ORGLA12G0180300 Oryza glaberrima ORGLA12G0180300 N 0.000
ORUFI11G03420 Oryza rufipogon ORUFI11G03420 N 0.000
OS11G0154500 Oryza sativa OS11G0154500 N 0.000
Pavir.Fa02204 Panicum virgatum Pavir.Fa02204 N 0.000
PGSC0003DMG400039898 Solanum tuberosum PGSC0003DMG400039898 I 0.000
PK29014.1 Cannabis sativa PK29014.1 N 0.000
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.000
SapurV1A.0076s0070 Salix purpurea SapurV1A.0076s0070 I 0.000
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.000
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.000
Si013995m.g Setaria italica Si013995m.g N 0.000
Thhalv10009466m.g Eutrema salsugineum Thhalv10009466m.g I 0.000
Traes_7BL_8A5D12EE1 Triticum aestivum Traes_7BL_8A5D12EE1 I 0.000
Traes_7DL_D05DA373C Triticum aestivum Traes_7DL_D05DA373C I 0.000
TRIUR3_29260 Triticum urartu TRIUR3_29260 I 0.000
VIT_19s0027g00910 Vitis vinifera VIT_19s0027g00910 I 0.000