CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART09G16830
(
Oryza barthii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OBART09G16830
T003173_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8GZQ2_MAIZE
M09720_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1A_02
0.751
0.804
DREB1A
M09710_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1A_01
0.738
0.922
DREB1A
M09711_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SED_Q2
0.738
0.922
Q8W236_WHEAT
M09724_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF1_02
0.685
0.725
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART09G16830.1
AP2
32
83
PVYRGVRRRGGRWVCEVRVPGRRGSRLWLGTFATAEAAARAHDAAMLAINAG
Links
Other
AP2
family TFs
Other
Oryza barthii
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy