OGLUM02G35980 (Oryza glumaepatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OGLUM02G35980 T003215_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF017
M06568_2.00
Arabidopsis thaliana
NHNYCRCCGWCMWH

DWKGWCGGYGRNDN
Dap-seq
OMalley et al.(2016)
At1g19210_col_a
0.724 0.840
ERF017
M06569_2.00
Arabidopsis thaliana
NNNHNNCRCCGWCMW

WKGWCGGYGNNDNNN
Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a
0.724 0.840
ERF018
M00842_2.00
Arabidopsis thaliana
HRCCGDCMN

NKGHCGGYD
PBM
Franco-Zorrilla et al.(2014)
ORA47
0.718 0.820
ERF018
M01610_2.00
Arabidopsis thaliana
NRCCGNCHN

NDGNCGGYN
PBM
Weirauch et al.(2014)
pTH7215
0.718 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM02G35980.1 AP2 16 67

Links

Other AP2 family TFs
Other Oryza glumaepatula TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29739.m003647 Ricinus communis 29739.m003647 I 0.716
29739.m003716 Ricinus communis 29739.m003716 I 0.733
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.697
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.713
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.812
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.685
Bo3g015600 Brassica oleracea Bo3g015600 I 0.687
Bo6g086740 Brassica oleracea Bo6g086740 I 0.710
Bo6g119120 Brassica oleracea Bo6g119120 I 0.714
Bo8g068370 Brassica oleracea Bo8g068370 I 0.733
Bo8g102870 Brassica oleracea Bo8g102870 I 0.722
Bo9g149820 Brassica oleracea Bo9g149820 I 0.686
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.686
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.718
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.700
Bra002377 Brassica rapa Bra002377 I 0.686
Bra003780 Brassica rapa Bra003780 I 0.711
Bra006599 Brassica rapa Bra006599 I 0.687
Bra015882 Brassica rapa Bra015882 I 0.726
Bra016518 Brassica rapa Bra016518 I 0.733
Bra025719 Brassica rapa Bra025719 I 0.686
Bra031069 Brassica rapa Bra031069 I 0.722
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.710
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.724
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.686
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.724
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.710
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.721
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.712
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.734
Ca_01683 Cicer arietinum Ca_01683 I 0.713
Ca_09124 Cicer arietinum Ca_09124 I 0.703
Ca_19295 Cicer arietinum Ca_19295 I 0.685
Ca_19296 Cicer arietinum Ca_19296 I 0.680
Ca_19297 Cicer arietinum Ca_19297 I 0.683
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.705
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.703
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.704
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.710
Cla007584 Citrullus lanatus Cla007584 I 0.721
Cla011318 Citrullus lanatus Cla011318 I 0.746
Cla022291 Citrullus lanatus Cla022291 I 0.726
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.726
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.746
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.743
ERF016 Arabidopsis thaliana AT5G21960 I 0.694
ERF017 Arabidopsis thaliana AT1G19210 D 0.724
ERF018 Arabidopsis thaliana AT1G74930 D 0.718
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.731
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.696
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.710
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.720
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.724
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.723
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.714
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.714
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.704
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.697
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.682
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.701
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.699
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.690
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.701
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.732
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.720
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.725
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.686
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.741
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.685
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.749
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.692
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.750
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.779
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.685
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.731
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.739
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.739
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.731
MDP0000649022 Malus domestica MDP0000649022 I 0.730
MDP0000704216 Malus domestica MDP0000704216 I 0.710
mgf021940m Mimulus guttatus mgf021940m I 0.729
mgf024162m Mimulus guttatus mgf024162m I 0.716
mgf025452m Mimulus guttatus mgf025452m I 0.715
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.704
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.696
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.696
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.683
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.683
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.697
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.703
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.703
OB02G41640 Oryza brachyantha OB02G41640 N 0.542
OB08G24280 Oryza brachyantha OB08G24280 I 0.685
OBART08G16950 Oryza barthii OBART08G16950 I 0.685
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.685
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.812
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.812
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.685
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.812
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.685
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.731
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.718
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.704
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.812
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.812
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.685
OS02G0781300 Oryza sativa OS02G0781300 I 0.812
OS08G0454000 Oryza sativa OS08G0454000 I 0.685
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.746
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.685
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.685
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.746
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.688
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.708
PK18548.1 Cannabis sativa PK18548.1 I 0.706
Pm027117 Prunus mume Pm027117 I 0.733
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.729
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.734
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.722
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.706
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.733
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.720
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.722
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.725
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.722
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.686
Si008104m.g Setaria italica Si008104m.g I 0.703
Si015027m.g Setaria italica Si015027m.g I 0.685
Si019636m.g Setaria italica Si019636m.g I 0.746
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.708
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.688
TCM_037415 Theobroma cacao TCM_037415 I 0.734
TCM_037486 Theobroma cacao TCM_037486 I 0.711
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.721
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.695
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.713
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.678
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.738
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.766
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.713