OGLUM03G05600 (Oryza glumaepatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OGLUM03G05600 T003221_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PLT1
M06622_2.00
Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN

NNDYCTYGRDWWNCGTGHH
Dap-seq
OMalley et al.(2016)
PLT1_col_a
0.880 0.865
PLT1
M06623_2.00
Arabidopsis thaliana
DYDCRNWTYYCRAG

CTYGRRAWNYGHRH
Dap-seq
OMalley et al.(2016)
PLT1_colamp_a
0.880 0.865
Q6SA75_TOBAC
M09733_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_01
0.873 0.865
Q6SA75_TOBAC
M09734_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_02
0.873 0.865
ANT
M02647_2.00
Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW

WDNRCHTBGGGAWNYGTGYNH
SELEX
Mathelier et al.(2014)
MA0571.1
0.858 0.846
ANT
M09705_2.00
Arabidopsis thaliana
CACRNWTCCCRAKG

CMTYGGGAWNYGTG
Transfac
Matys et al.(2006)
P$ANT_01
0.858 0.846
AIL7
M06688_2.00
Arabidopsis thaliana
CRNWTHYCRAG

CTYGRDAWNYG
Dap-seq
OMalley et al.(2016)
AIL7_col_a
0.817 0.827
AIL7
M06689_2.00
Arabidopsis thaliana
DCRNWTHYCRAG

CTYGRDAWNYGH
Dap-seq
OMalley et al.(2016)
AIL7_colamp_a
0.817 0.827
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM03G05600.1 AP2 252 309
OGLUM03G05600.1 AP2 351 403

Links

Other AP2 family TFs
Other Oryza glumaepatula TFs

527 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_047770 Acremonium chrysogenum ACRE_047770 I 0.000
AGABI2DRAFT_192991 Agaricus bisporus AGABI2DRAFT_192991 N 0.000
AOL_s00078g125 Arthrobotrys oligospora AOL_s00078g125 N 0.000
BBA_05338 Beauveria bassiana BBA_05338 I 0.000
BN946_scf184783.g11 Trametes cinnabarina BN946_scf184783.g11 N 0.000
BOTBODRAFT_121202 Botryobasidium botryosum BOTBODRAFT_121202 I 0.000
CERSUDRAFT_112805 Ceriporiopsis subvermispora CERSUDRAFT_112805 N 0.000
CPUR_08194 Claviceps purpurea CPUR_08194 I 0.000
CY34DRAFT_134098 Suillus luteus CY34DRAFT_134098 N 0.000
DACRYDRAFT_49314 Dacryopinax sp DACRYDRAFT_49314 N 0.000
estExt_fgenesh1_pm.C_110082 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_110082 I 0.000
FFUJ_04051 Fusarium fujikuroi FFUJ_04051 I 0.000
fgenesh1_pg.sca_1_chr1_3_0001184 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0001184 I 0.000
FGRRES_09339 Fusarium graminearum FGRRES_09339 I 0.000
FOXG_05887 Fusarium oxysporum FOXG_05887 I 0.000
FPSE_05044 Fusarium pseudograminearum FPSE_05044 I 0.000
FVEG_03759 Fusarium verticillioides FVEG_03759 I 0.000
GALMADRAFT_1298303 Galerina marginata GALMADRAFT_1298303 N 0.000
GALMADRAFT_143289 Galerina marginata GALMADRAFT_143289 N 0.000
GALMADRAFT_75179 Galerina marginata GALMADRAFT_75179 N 0.000
GALMADRAFT_91917 Galerina marginata GALMADRAFT_91917 N 0.000
GALMADRAFT_923040 Galerina marginata GALMADRAFT_923040 N 0.000
GGTG_04012 Gaeumannomyces graminis GGTG_04012 I 0.000
GLOTRDRAFT_133387 Gloeophyllum trabeum GLOTRDRAFT_133387 N 0.000
GYMLUDRAFT_115352 Gymnopus luxurians GYMLUDRAFT_115352 N 0.000
H072_1342 Dactylellina haptotyla H072_1342 N 0.000
HETIRDRAFT_459848 Heterobasidion irregulare HETIRDRAFT_459848 N 0.000
JAAARDRAFT_30535 Jaapia argillacea JAAARDRAFT_30535 N 0.000
JAAARDRAFT_645626 Jaapia argillacea JAAARDRAFT_645626 N 0.000
K443DRAFT_361864 Laccaria amethystina K443DRAFT_361864 N 0.000
KAFR_0E00800 Kazachstania africana KAFR_0E00800 I 0.000
LACBIDRAFT_293207 Laccaria bicolor LACBIDRAFT_293207 N 0.000
LACBIDRAFT_302141 Laccaria bicolor LACBIDRAFT_302141 N 0.000
M378DRAFT_55133 Amanita muscaria M378DRAFT_55133 N 0.000
M404DRAFT_388312 Pisolithus tinctorius M404DRAFT_388312 N 0.000
M407DRAFT_240766 Tulasnella calospora M407DRAFT_240766 N 0.000
M422DRAFT_782754 Sphaerobolus stellatus M422DRAFT_782754 N 0.000
MAC_07653 Metarhizium acridum MAC_07653 I 0.000
MAJ_09006 Metarhizium majus MAJ_09006 I 0.000
MANI_022643 Metarhizium anisopliae MANI_022643 I 0.000
MAPG_00433 Magnaporthe poae MAPG_00433 I 0.000
MBR_00020 Metarhizium brunneum MBR_00020 I 0.000
MELLADRAFT_32043 Melampsora laricipopulina MELLADRAFT_32043 N 0.000
MGG_01204 Magnaporthe oryzae MGG_01204 I 0.000
MGU_09177 Metarhizium guizhouense MGU_09177 I 0.000
Moror_4352 Moniliophthora roreri Moror_4352 N 0.000
MPER_07979 Moniliophthora perniciosa MPER_07979 N 0.000
MVLG_02620 Microbotryum violaceum MVLG_02620 N 0.000
MYCFIDRAFT_72135 Pseudocercospora fijiensis MYCFIDRAFT_72135 I 0.000
NechaG75573 Fusarium solani NechaG75573 I 0.000
PAAG_00645 Paracoccidioides sp lutzii PAAG_00645 I 0.000
PABG_01574 Paracoccidioides brasiliensis PABG_01574 I 0.000
PHACADRAFT_58963 Phanerochaete carnosa PHACADRAFT_58963 N 0.000
PHLGIDRAFT_36660 Phlebiopsis gigantea PHLGIDRAFT_36660 N 0.000
PIIN_03660 Piriformospora indica PIIN_03660 N 0.000
PILCRDRAFT_571433 Piloderma croceum PILCRDRAFT_571433 N 0.000
PILCRDRAFT_603306 Piloderma croceum PILCRDRAFT_603306 N 0.000
PISMIDRAFT_680570 Pisolithus microcarpus PISMIDRAFT_680570 N 0.000
PLEOSDRAFT_1033113 Pleurotus ostreatus PLEOSDRAFT_1033113 N 0.000
POSPLDRAFT_104793 Postia placenta POSPLDRAFT_104793 N 0.000
PV09_04800 Verruconis gallopava PV09_04800 I 0.000
SAKL0H09416g Lachancea kluyveri SAKL0H09416g I 0.000
SCHCODRAFT_258818 Schizophyllum commune SCHCODRAFT_258818 N 0.000
SCHCODRAFT_81364 Schizophyllum commune SCHCODRAFT_81364 N 0.000
SCLCIDRAFT_969057 Scleroderma citrinum SCLCIDRAFT_969057 N 0.000
SERLA73DRAFT_185178 Serpula lacrymans SERLA73DRAFT_185178 N 0.000
TBLA_0H03770 Tetrapisispora blattae TBLA_0H03770 I 0.000
TRIREDRAFT_68097 Trichoderma reesei TRIREDRAFT_68097 I 0.000
TRIVIDRAFT_144166 Trichoderma virens TRIVIDRAFT_144166 I 0.000
UV8b_2080 Ustilaginoidea virens UV8b_2080 I 0.000
V565_186740 Rhizoctonia solani V565_186740 I 0.000
VDAG_00939 Verticillium dahliae VDAG_00939 I 0.000
VHEMI03693 Torrubiella hemipterigena VHEMI03693 I 0.000
X797_009919 Metarhizium robertsii X797_009919 I 0.000