OGLUM05G13290 (Oryza glumaepatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OGLUM05G13290 T003256_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q84ND8_HORVU
M09719_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DRF11_01
0.712 0.920
Q84JE9_HORVU
M09718_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DRF13_01
0.712 0.920
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.682 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM05G13290.1 AP2 133 184

Links

Other AP2 family TFs
Other Oryza glumaepatula TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ONIVA05G13030 Oryza nivara ONIVA05G13030 I 0.834
OPUNC05G10700 Oryza punctata OPUNC05G10700 I 0.834
OLONG_017780 Oryza longistaminata OLONG_017780 I 0.834
OMERI05G11290 Oryza meridionalis OMERI05G11290 I 0.834
BGIOSGA018253 Oryza indica BGIOSGA018253 I 0.834
OBART05G12580 Oryza barthii OBART05G12580 I 0.826
ORGLA05G0107600 Oryza glaberrima ORGLA05G0107600 I 0.826
ORUFI05G13560 Oryza rufipogon ORUFI05G13560 I 0.825
LPERR05G09930 Leersia perrieri LPERR05G09930 I 0.778
OB05G20700 Oryza brachyantha OB05G20700 I 0.771
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.729
BRADI2G29960 Brachypodium distachyon BRADI2G29960 I 0.727
Q84JE9_HORVU Hordeum vulgare Q84JE9_HORVU D 0.712
MLOC_77405 Hordeum vulgare MLOC_77405 I 0.712
Q84ND8_HORVU Hordeum vulgare Q84ND8_HORVU D 0.712
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.701
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.694
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.694
Bo9g177130 Brassica oleracea Bo9g177130 I 0.692
GLYMA12G32400 Glycine max GLYMA12G32400 I 0.684
GLYMA13G38030 Glycine max GLYMA13G38030 I 0.684
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.683
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.682
PK07402.1 Cannabis sativa PK07402.1 D 0.682
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.681
F775_32062 Aegilops tauschii F775_32062 I 0.681
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.681
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.681
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.680
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.680
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.678
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.677