CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM07G07330
(
Oryza glumaepatula
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OGLUM07G07330
T003287_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD
HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.838
0.949
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.833
0.919
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.824
0.939
P93632_MAIZE
M09712_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.790
0.818
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM07G07330.1
AP2
121
171
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGL
OGLUM07G07330.1
AP2
213
264
SKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGR
OGLUM07G07330.2
AP2
121
171
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGL
OGLUM07G07330.2
AP2
213
264
SKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGR
OGLUM07G07330.3
AP2
121
171
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGL
OGLUM07G07330.3
AP2
213
264
SKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGR
OGLUM07G07330.4
AP2
121
171
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGL
OGLUM07G07330.4
AP2
213
264
SKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGR
OGLUM07G07330.5
AP2
121
152
SQYRGVTFYRRTGRWESHIWAYDRAAIKFRGL
OGLUM07G07330.5
AP2
220
271
SKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGR
Links
Other
AP2
family TFs
Other
Oryza glumaepatula
TFs
245 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy