CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM07G10870
(
Oryza glumaepatula
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OGLUM07G10870
T003288_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
P93392_TOBAC
M09731_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OPBP1_01
0.697
0.796
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD
HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.695
0.694
Q5Y836_TOBAC
M09732_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF5_02
0.689
0.776
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM07G10870.1
AP2
72
124
AGFIGVRKRPWGRFAAEIRDSTRNGVRVWLGTFDSAEAAAMAYDQAALSARGA
Links
Other
AP2
family TFs
Other
Oryza glumaepatula
TFs
215 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy