CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM09G04680
(
Oryza glumaepatula
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OGLUM09G04680
T003306_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
A5JTT1_WHEAT
M09700_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_01
0.706
0.674
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM09G04680.1
AP2
113
161
PYRGIRQRPWGRWASEIRDPVKGIRVWLGTFDTAEGAARAYDDEVRRIY
Links
Other
AP2
family TFs
Other
Oryza glumaepatula
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy