OLONG_004398 (Oryza longistaminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OLONG_004398 T003338_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WIN1
M01603_2.00
Arabidopsis thaliana
VCRCCGCNNN

NNNGCGGYGB
PBM
Weirauch et al.(2014)
pTH7566
0.813 0.961
ERF003
M06667_2.00
Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN

NDRHDDHKRCGGYGGHGRH
Dap-seq
OMalley et al.(2016)
ESE3_col_a
0.754 0.843
ERF003
M06668_2.00
Arabidopsis thaliana
HDYCKCCGCCGYHDH

DHDRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
ESE3_colamp_a
0.754 0.843
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_004398-R1 AP2 6 57

Links

Other AP2 family TFs
Other Oryza longistaminata TFs

297 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIBMGA011510 Bombyx mori BGIBMGA011510 N 0.000
HmN_000834300 Hymenolepis microstoma HmN_000834300 N 0.000
EmuJ_000949000 Echinococcus multilocularis EmuJ_000949000 N 0.000
ECANG7_06454 Echinococcus canadensis ECANG7_06454 N 0.000
Sakowv30041832m.g Saccoglossus kowalevskii Sakowv30041832m.g N 0.000
estExt_fgenesh2_pg.C_4800031 Branchiostoma floridae estExt_fgenesh2_pg.C_4800031 N 0.000
PHUM239100 Pediculus humanus PHUM239100 N 0.000
MCINX002154 Melitaea cinxia MCINX002154 N 0.000
HMEL006500 Heliconius melpomene HMEL006500 N 0.000
CGI_10009013 Crassostrea gigas CGI_10009013 N 0.000
TASK_0000823901 Taenia asiatica TASK_0000823901 N 0.000