CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_005597
(
Oryza longistaminata
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OLONG_005597
T003342_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD
HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.782
0.804
P93392_TOBAC
M09731_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OPBP1_01
0.696
0.725
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_005597-R1
AP2
43
94
QLIGVRKRPWGKFAAEIRDSTRKGARVWLGTFDSPEAAAMAYDQAAFSVRGA
Links
Other
AP2
family TFs
Other
Oryza longistaminata
TFs
302 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy