OLONG_010226 (Oryza longistaminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OLONG_010226 T003350_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF096
M01630_2.00
Arabidopsis thaliana
NVGCCGNCNN

NNGNCGGCBN
PBM
Weirauch et al.(2014)
pTH7909
0.702 0.788
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_010226-R1 AP2 19 71

Links

Other AP2 family TFs
Other Oryza longistaminata TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_33015 Aegilops tauschii F775_33015 I 0.830
F775_23071 Aegilops tauschii F775_23071 I 0.718
F775_03520 Aegilops tauschii F775_03520 I 0.696
AMTR_s00021p00185480 Amborella trichopoda AMTR_s00021p00185480 I 0.679
AMTR_s00009p00147970 Amborella trichopoda AMTR_s00009p00147970 I 0.696
AMTR_s00009p00148470 Amborella trichopoda AMTR_s00009p00148470 I 0.692
Aquca_034_00377 Aquilegia coerulea Aquca_034_00377 N 0.739
ATERF14 Arabidopsis lyrata scaffold_100393.1 I 0.677
scaffold_800707.1 Arabidopsis lyrata scaffold_800707.1 I 0.702
ERF096 Arabidopsis thaliana AT5G43410 D 0.702
Bostr.3148s0125 Boechera stricta Bostr.3148s0125 I 0.702
Bostr.26675s0318 Boechera stricta Bostr.26675s0318 I 0.678
BRADI3G12565 Brachypodium distachyon BRADI3G12565 I 0.806
BRADI1G75040 Brachypodium distachyon BRADI1G75040 I 0.677
Bo9g059180 Brassica oleracea Bo9g059180 I 0.702
Bra027493 Brassica rapa Bra027493 I 0.702
Cagra.1671s0052 Capsella grandiflora Cagra.1671s0052 I 0.678
Cagra.0244s0009 Capsella grandiflora Cagra.0244s0009 I 0.702
Carubv10011057m.g Capsella rubella Carubv10011057m.g I 0.678
Carubv10028227m.g Capsella rubella Carubv10028227m.g I 0.689
evm.TU.supercontig_44.74 Carica papaya evm.TU.supercontig_44.74 I 0.685
Cla007696 Citrullus lanatus Cla007696 I 0.684
Cla015064 Citrullus lanatus Cla015064 I 0.696
Cla021852 Citrullus lanatus Cla021852 I 0.716
Ciclev10007133m.g Citrus clementina Ciclev10007133m.g I 0.697
Ciclev10006784m.g Citrus clementina Ciclev10006784m.g I 0.686
orange1.1g047241m.g Citrus sinensis orange1.1g047241m.g I 0.697
orange1.1g048608m.g Citrus sinensis orange1.1g048608m.g I 0.686
Cucsa.383680 Cucumis sativus Cucsa.383680 I 0.694
Cucsa.255320 Cucumis sativus Cucsa.255320 I 0.716
Eucgr.H03090 Eucalyptus grandis Eucgr.H03090 I 0.710
Eucgr.B01537 Eucalyptus grandis Eucgr.B01537 I 0.691
Thhalv10009418m.g Eutrema salsugineum Thhalv10009418m.g I 0.677
Thhalv10003355m.g Eutrema salsugineum Thhalv10003355m.g I 0.703
gene08071-v1.0-hybrid Fragaria vesca gene08071-v1.0-hybrid I 0.683
gene11440-v1.0-hybrid Fragaria vesca gene11440-v1.0-hybrid I 0.684
GLYMA02G00890 Glycine max GLYMA02G00890 I 0.718
GLYMA10G33080 Glycine max GLYMA10G33080 I 0.691
GLYMA20G34550 Glycine max GLYMA20G34550 I 0.701
Gorai.006G249800 Gossypium raimondii Gorai.006G249800 I 0.715
Gorai.001G176600 Gossypium raimondii Gorai.001G176600 I 0.683
Gorai.005G049200 Gossypium raimondii Gorai.005G049200 I 0.693
LPERR09G16370 Leersia perrieri LPERR09G16370 I 0.722
LPERR08G20550 Leersia perrieri LPERR08G20550 I 0.830
LPERR04G03550 Leersia perrieri LPERR04G03550 I 0.694
Lus10021196.g Linum usitatissimum Lus10021196.g I 0.694
Lus10011831.g Linum usitatissimum Lus10011831.g I 0.703
LjSGA_028626.1 Lotus japonicus LjSGA_028626.1 I 0.692
cassava38508.m1 Manihot esculenta cassava38508.m1 I 0.717
cassava3323.m1 Manihot esculenta cassava3323.m1 I 0.677
cassava41615.m1 Manihot esculenta cassava41615.m1 I 0.739
cassava631.valid.m1 Manihot esculenta cassava631.valid.m1 I 0.708
mgf018935m Mimulus guttatus mgf018935m I 0.698
GSMUA_Achr1G15350_001 Musa acuminata GSMUA_Achr1G15350_001 I 0.694
OBART10G11630 Oryza barthii OBART10G11630 I 0.697
OBART09G20380 Oryza barthii OBART09G20380 I 0.722
OBART08G23880 Oryza barthii OBART08G23880 I 0.830
OBART04G05450 Oryza barthii OBART04G05450 I 0.695
OB04G14270 Oryza brachyantha OB04G14270 I 0.695
OB08G30700 Oryza brachyantha OB08G30700 I 0.830
OB09G27120 Oryza brachyantha OB09G27120 I 0.721
ORGLA10G0102500 Oryza glaberrima ORGLA10G0102500 I 0.697
ORGLA09G0166700 Oryza glaberrima ORGLA09G0166700 I 0.722
ORGLA08G0192600 Oryza glaberrima ORGLA08G0192600 I 0.830
ORGLA04G0041100 Oryza glaberrima ORGLA04G0041100 I 0.695
OGLUM04G04620 Oryza glumaepatula OGLUM04G04620 I 0.695
OGLUM08G25360 Oryza glumaepatula OGLUM08G25360 I 0.830
OGLUM09G21140 Oryza glumaepatula OGLUM09G21140 I 0.722
OGLUM10G11380 Oryza glumaepatula OGLUM10G11380 I 0.697
BGIOSGA015474 Oryza indica BGIOSGA015474 I 0.695
BGIOSGA029205 Oryza indica BGIOSGA029205 I 0.830
BGIOSGA031822 Oryza indica BGIOSGA031822 I 0.697
BGIOSGA029230 Oryza indica BGIOSGA029230 I 0.722
BGIOSGA029206 Oryza indica BGIOSGA029206 I 0.830
OLONG_005596 Oryza longistaminata OLONG_005596 I 0.722
OLONG_027600 Oryza longistaminata OLONG_027600 I 0.695
OMERI08G18690 Oryza meridionalis OMERI08G18690 I 0.830
OMERI03G03710 Oryza meridionalis OMERI03G03710 I 0.683
ONIVA01G39370 Oryza nivara ONIVA01G39370 I 0.722
ONIVA04G03680 Oryza nivara ONIVA04G03680 I 0.695
ONIVA09G01310 Oryza nivara ONIVA09G01310 I 0.830
ONIVA10G10810 Oryza nivara ONIVA10G10810 I 0.697
OPUNC09G18680 Oryza punctata OPUNC09G18680 I 0.722
OPUNC08G21790 Oryza punctata OPUNC08G21790 I 0.830
OPUNC10G09910 Oryza punctata OPUNC10G09910 I 0.697
ORUFI09G22030 Oryza rufipogon ORUFI09G22030 I 0.722
ORUFI10G12140 Oryza rufipogon ORUFI10G12140 I 0.697
ORUFI08G26360 Oryza rufipogon ORUFI08G26360 I 0.830
ORUFI04G06330 Oryza rufipogon ORUFI04G06330 I 0.695
OS04G0257500 Oryza sativa OS04G0257500 I 0.695
OS09G0571700 Oryza sativa OS09G0571700 I 0.722
Pavir.Fb02184 Panicum virgatum Pavir.Fb02184 I 0.830
Pavir.Bb01308 Panicum virgatum Pavir.Bb01308 I 0.723
Pavir.Fa00010 Panicum virgatum Pavir.Fa00010 I 0.830
POPTR_0010s08330 Populus trichocarpa POPTR_0010s08330 I 0.700
POPTR_0010s08310 Populus trichocarpa POPTR_0010s08310 I 0.706
POPTR_0008s16590 Populus trichocarpa POPTR_0008s16590 I 0.687
29584.m000237 Ricinus communis 29584.m000237 I 0.697
29603.m000510 Ricinus communis 29603.m000510 I 0.715
SapurV1A.0021s1000 Salix purpurea SapurV1A.0021s1000 I 0.687
SapurV1A.0292s0020 Salix purpurea SapurV1A.0292s0020 I 0.687
SapurV1A.0292s0010 Salix purpurea SapurV1A.0292s0010 I 0.678
SapurV1A.0006s0870 Salix purpurea SapurV1A.0006s0870 I 0.680
SapurV1A.0007s0960 Salix purpurea SapurV1A.0007s0960 I 0.708
SapurV1A.0021s0990 Salix purpurea SapurV1A.0021s0990 I 0.678
Si015487m.g Setaria italica Si015487m.g I 0.830
Si032391m.g Setaria italica Si032391m.g I 0.723
Si011941m.g Setaria italica Si011941m.g I 0.809
Si040039m.g Setaria italica Si040039m.g I 0.800
Solyc09g089910.1 Solanum lycopersicum Solyc09g089910.1 I 0.717
Solyc11g006050.1 Solanum lycopersicum Solyc11g006050.1 I 0.706
PGSC0003DMG400017233 Solanum tuberosum PGSC0003DMG400017233 I 0.717
PGSC0003DMG400045092 Solanum tuberosum PGSC0003DMG400045092 I 0.704
Sb07g023803 Sorghum bicolor Sb07g023803 I 0.830
TCM_020869 Theobroma cacao TCM_020869 I 0.693
Traes_4AS_FA4BBDBF9 Triticum aestivum Traes_4AS_FA4BBDBF9 I 0.718
Traes_4BS_180379032 Triticum aestivum Traes_4BS_180379032 I 0.718
Traes_4DS_AB2BEFAB3 Triticum aestivum Traes_4DS_AB2BEFAB3 I 0.718
Traes_6BS_4C945B9F1 Triticum aestivum Traes_6BS_4C945B9F1 I 0.701
TRIUR3_22798 Triticum urartu TRIUR3_22798 I 0.718
VIT_07s0005g03200 Vitis vinifera VIT_07s0005g03200 I 0.702
VIT_07s0005g03210 Vitis vinifera VIT_07s0005g03210 I 0.698
GRMZM2G060206 Zea mays GRMZM2G060206 I 0.821
GRMZM2G060517 Zea mays GRMZM2G060517 I 0.723