OLONG_014256 (Oryza longistaminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OLONG_014256 T003355_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PLT1
M06622_2.00
Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN

NNDYCTYGRDWWNCGTGHH
Dap-seq
OMalley et al.(2016)
PLT1_col_a
0.679 0.707
PLT1
M06623_2.00
Arabidopsis thaliana
DYDCRNWTYYCRAG

CTYGRRAWNYGHRH
Dap-seq
OMalley et al.(2016)
PLT1_colamp_a
0.679 0.707
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_014256-R1 AP2 111 165
OLONG_014256-R1 AP2 207 258

Links

Other AP2 family TFs
Other Oryza longistaminata TFs

Invalid Input OrderBy

337 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action