OLONG_017837 (Oryza longistaminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OLONG_017837 T003360_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF14
M01647_2.00 		Arabidopsis thaliana
NNVACAKN
NMTGTBNN		 PBM
Weirauch et al.(2014)
pTH8296 		0.731 0.806
TEM1
M01605_2.00 		Arabidopsis thaliana
RCAACATW
WATGTTGY		 PBM
Weirauch et al.(2014)
pTH8264 		0.728 0.833
RAV2
M01609_2.00 		Arabidopsis thaliana
RCAACATH
DATGTTGY		 PBM
Weirauch et al.(2014)
pTH8279 		0.728 0.833
RAV1
M01645_2.00 		Arabidopsis thaliana
NNNNVDCABN
NVTGHBNNNN		 PBM
Weirauch et al.(2014)
pTH8249 		0.722 0.806
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_017837-R1 AP2 75 110

Links

Other AP2 family TFs
Other Oryza longistaminata TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TEM1 Arabidopsis thaliana AT1G25560 D 0.728
RAV2 Arabidopsis thaliana AT1G68840 D 0.728
Traes_4BL_5B2AF2556 Triticum aestivum Traes_4BL_5B2AF2556 I 0.711
Traes_4DL_FE7B7E018 Triticum aestivum Traes_4DL_FE7B7E018 I 0.711
Si039493m.g Setaria italica Si039493m.g I 0.686