CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA03G25220
(
Oryza nivara
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
ONIVA03G25220
T003578_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD
HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.838
0.949
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.833
0.919
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.824
0.939
P93632_MAIZE
M09712_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.790
0.818
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA03G25220.1
AP2
121
171
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGL
ONIVA03G25220.1
AP2
213
264
SKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGR
ONIVA03G25220.2
AP2
121
171
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGL
ONIVA03G25220.2
AP2
213
264
SKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGR
ONIVA03G25220.3
AP2
121
152
SQYRGVTFYRRTGRWESHIWAYDRAAIKFRGL
ONIVA03G25220.3
AP2
194
245
SKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGR
ONIVA03G25220.4
AP2
121
171
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGL
ONIVA03G25220.4
AP2
213
264
SKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGR
ONIVA03G25220.5
AP2
121
152
SQYRGVTFYRRTGRWESHIWAYDRAAIKFRGL
ONIVA03G25220.5
AP2
194
245
SKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGR
ONIVA03G25220.6
AP2
121
152
SQYRGVTFYRRTGRWESHIWAYDRAAIKFRGL
ONIVA03G25220.6
AP2
194
245
SKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGR
Links
Other
AP2
family TFs
Other
Oryza nivara
TFs
245 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy