ONIVA09G01190 (Oryza nivara)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ONIVA09G01190 T003653_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q1ESI9_MAIZE
M09714_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB2A_02
0.701 0.816
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.686 0.816
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.682 0.816
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.682 0.816
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.682 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA09G01190.1 AP2 53 104

Links

Other AP2 family TFs
Other Oryza nivara TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo6g066790 Brassica oleracea Bo6g066790 I 0.000
PGSC0003DMG400017990 Solanum tuberosum PGSC0003DMG400017990 I 0.000
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.000
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I 0.000
Si002203m.g Setaria italica Si002203m.g I 0.000
Solyc05g050330.2 Solanum lycopersicum Solyc05g050330.2 I 0.000
WRKY55 Vitis vinifera VIT_13s0067g03130 I 0.000
Ca_21669 Cicer arietinum Ca_21669 I 0.000
29729.m002370 Ricinus communis 29729.m002370 I 0.000
mgf026576m Mimulus guttatus mgf026576m I 0.000
MDP0000175240 Malus domestica MDP0000175240 I 0.000
Pavir.Ea02282 Panicum virgatum Pavir.Ea02282 I 0.000
Pavir.Eb01752 Panicum virgatum Pavir.Eb01752 I 0.000
PGSC0003DMG400012160 Solanum tuberosum PGSC0003DMG400012160 I 0.000
OS05G0571200 Oryza sativa OS05G0571200 I 0.000
GRMZM2G411766 Zea mays GRMZM2G411766 I 0.000
LPERR05G22060 Leersia perrieri LPERR05G22060 I 0.000
OB05G34020 Oryza brachyantha OB05G34020 I 0.000
OBART05G26430 Oryza barthii OBART05G26430 I 0.000
OGLUM05G28080 Oryza glumaepatula OGLUM05G28080 I 0.000
OLONG_010067 Oryza longistaminata OLONG_010067 I 0.000
OMERI03G30520 Oryza meridionalis OMERI03G30520 I 0.000
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.000
ONIVA05G28480 Oryza nivara ONIVA05G28480 I 0.000
OPUNC05G24020 Oryza punctata OPUNC05G24020 I 0.000
ORGLA03G0413100 Oryza glaberrima ORGLA03G0413100 I 0.000
ORGLA05G0229200 Oryza glaberrima ORGLA05G0229200 I 0.000
ORUFI05G28340 Oryza rufipogon ORUFI05G28340 I 0.000
PGSC0003DMG402033880 Solanum tuberosum PGSC0003DMG402033880 N 0.000
PGSC0003DMG401033880 Solanum tuberosum PGSC0003DMG401033880 N 0.000
PGSC0003DMG400033884 Solanum tuberosum PGSC0003DMG400033884 N 0.000
Solyc05g050340.2 Solanum lycopersicum Solyc05g050340.2 N 0.000