ONIVA09G17920 (Oryza nivara)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ONIVA09G17920 T003664_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.726 0.745
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.726 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA09G17920.1 AP2 25 76

Links

Other AP2 family TFs
Other Oryza nivara TFs

262 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.726
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.739
mgf022665m Mimulus guttatus mgf022665m I 0.724
mgf018851m Mimulus guttatus mgf018851m I 0.800
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.713
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.774
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.750
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.749
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.739
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.745
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.747
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.752
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.800
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.783
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.720
mgf022810m Mimulus guttatus mgf022810m I 0.703
mgf023693m Mimulus guttatus mgf023693m I 0.703
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.718
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.747
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.800
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.736
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.713
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.748
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.726
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.726
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.726
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.691
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.744
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.723
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.750
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.750
30174.m009031 Ricinus communis 30174.m009031 I 0.740
30174.m008961 Ricinus communis 30174.m008961 I 0.796
Ca_08232 Cicer arietinum Ca_08232 I 0.726
Ca_00417 Cicer arietinum Ca_00417 I 0.725
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.718
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.748
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.726
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.692
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.748
Traes_2BS_B1A73C7A8 Triticum aestivum Traes_2BS_B1A73C7A8 I 0.679
TCM_040015 Theobroma cacao TCM_040015 I 0.726
TCM_025913 Theobroma cacao TCM_025913 I 0.726
TCM_018659 Theobroma cacao TCM_018659 I 0.748
TCM_015579 Theobroma cacao TCM_015579 I 0.736
TCM_014471 Theobroma cacao TCM_014471 I 0.726
Ca_10494 Cicer arietinum Ca_10494 I 0.748
Ca_16397 Cicer arietinum Ca_16397 I 0.768
30084.m000185 Ricinus communis 30084.m000185 I 0.726
30068.m002623 Ricinus communis 30068.m002623 I 0.734
29813.m001543 Ricinus communis 29813.m001543 I 0.747
29635.m000461 Ricinus communis 29635.m000461 I 0.748
Pm030235 Prunus mume Pm030235 I 0.727
Pm025326 Prunus mume Pm025326 I 0.726
Pm015931 Prunus mume Pm015931 I 0.748
Pm008788 Prunus mume Pm008788 I 0.800
Pm000004 Prunus mume Pm000004 I 0.715
Cla021590 Citrullus lanatus Cla021590 I 0.774
Cla012318 Citrullus lanatus Cla012318 I 0.713
Cla010474 Citrullus lanatus Cla010474 I 0.750
Ca_25424 Cicer arietinum Ca_25424 I 0.737
TCM_011632 Theobroma cacao TCM_011632 I 0.750
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.726
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.719
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.725
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.809
Pavir.Ba00533 Panicum virgatum Pavir.Ba00533 I 0.682
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.748
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.747
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.713
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.800
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.713
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.736
MDP0000551969 Malus domestica MDP0000551969 I 0.748
MDP0000525933 Malus domestica MDP0000525933 I 0.715
MDP0000197375 Malus domestica MDP0000197375 I 0.727
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.750
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.750
PK28640.1 Cannabis sativa PK28640.1 I 0.707
PK25269.1 Cannabis sativa PK25269.1 I 0.767
PK13330.1 Cannabis sativa PK13330.1 I 0.748
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.726
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.800
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.736
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.726
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.748
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.700
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.750
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.750
Pavir.J19478 Panicum virgatum Pavir.J19478 I 0.682
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.750
MDP0000177547 Malus domestica MDP0000177547 I 0.726
MDP0000157628 Malus domestica MDP0000157628 I 0.727
MDP0000138669 Malus domestica MDP0000138669 I 0.800
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.750
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.800
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.681
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.748
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.712
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.800
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.726
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.748
MDP0000276536 Malus domestica MDP0000276536 I 0.748
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.733
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.726
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.779
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.748
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.736
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.679
MDP0000133476 Malus domestica MDP0000133476 I 0.800
MDP0000128326 Malus domestica MDP0000128326 I 0.681
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.797
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.732
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.743
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.743
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.800
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.725
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.729
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.750
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.713
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.750
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.726
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.731
TCM_005425 Theobroma cacao TCM_005425 I 0.800
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.726
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.697
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.748
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.737
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.748
MLOC_69002 Hordeum vulgare MLOC_69002 I 0.679
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.716
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.784
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.696
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.726
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.726
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.748
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.772
GRMZM2G384386 Zea mays GRMZM2G384386 I 0.681
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.755
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.726
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.768
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.748
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.819
OMERI07G16350 Oryza meridionalis OMERI07G16350 I 0.679
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.726
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.748
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.784
OGLUM07G19400 Oryza glumaepatula OGLUM07G19400 I 0.679
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.726
OBART12G17080 Oryza barthii OBART12G17080 I 0.748
OBART07G19610 Oryza barthii OBART07G19610 I 0.679
OBART07G06690 Oryza barthii OBART07G06690 I 0.726
OB09G23520 Oryza brachyantha OB09G23520 I 0.775
OB07G15030 Oryza brachyantha OB07G15030 I 0.726
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.748
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.803
Bra020063 Brassica rapa Bra020063 I 0.726
Bra006518 Brassica rapa Bra006518 I 0.726
Bra002262 Brassica rapa Bra002262 I 0.726
Bo9g152440 Brassica oleracea Bo9g152440 I 0.726
Bo3g013830 Brassica oleracea Bo3g013830 I 0.726
Bo2g018360 Brassica oleracea Bo2g018360 I 0.726
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.748
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.821
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.726
BGIOSGA024035 Oryza indica BGIOSGA024035 I 0.679
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.797
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.724
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.720
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.685
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.685
F775_02727 Aegilops tauschii F775_02727 I 0.748
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.682
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.750
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.726
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.748
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.748
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.739
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.681
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.726
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.748
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.768
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.681
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.768
F775_04303 Aegilops tauschii F775_04303 I 0.710
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.733
ONIVA07G17970 Oryza nivara ONIVA07G17970 I 0.679
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.683
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.750
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.715
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.748
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.800
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.727
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.726
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.748
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.800
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.705
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.739
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.726
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.726
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.725
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.803
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.748
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.739
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.784
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.696
Si038848m.g Setaria italica Si038848m.g I 0.748
Si032213m.g Setaria italica Si032213m.g I 0.809
Si030686m.g Setaria italica Si030686m.g I 0.682
Si027288m.g Setaria italica Si027288m.g I 0.752
Si024417m.g Setaria italica Si024417m.g I 0.750
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.689
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.689
Si033237m.g Setaria italica Si033237m.g I 0.725
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.726
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.739
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.696
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.748
OS12G0582900 Oryza sativa OS12G0582900 I 0.748
OS07G0204000 Oryza sativa OS07G0204000 I 0.726
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.748
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.748
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.726
ORGLA07G0253000 Oryza glaberrima ORGLA07G0253000 I 0.679
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.748
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.726
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.819
ORUFI07G20430 Oryza rufipogon ORUFI07G20430 I 0.679
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.819
OPUNC07G18550 Oryza punctata OPUNC07G18550 I 0.679
OS07G0575000 Oryza sativa OS07G0575000 I 0.679
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.683
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.748
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.784
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.721
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.696
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.702
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.695
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.698
chr1.CM0284.80.nd Lotus japonicus chr1.CM0284.80.nd N 0.700
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.698
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.681
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.681
mgf024137m Mimulus guttatus mgf024137m N 0.686
Cla005054 Citrullus lanatus Cla005054 N 0.709
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.703
POPTR_0002s15480 Populus trichocarpa POPTR_0002s15480 N 0.712
MDP0000127123 Malus domestica MDP0000127123 N 0.710
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.715
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.702
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.706
Cucsa.193280 Cucumis sativus Cucsa.193280 N 0.709
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.703
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.709
MDP0000316843 Malus domestica MDP0000316843 N 0.694
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.694
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.698
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.694
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.698
gene26182-v1.0-hybrid Fragaria vesca gene26182-v1.0-hybrid N 0.699
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.703
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.706