ORGLA02G0193000 (Oryza glaberrima)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORGLA02G0193000 T003851_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LEP
M06661_2.00
Arabidopsis thaliana
NBCKCCGCCGYHDHHDYHNHH

DDNDRHDDHDRCGGCGGMGVN
Dap-seq
OMalley et al.(2016)
LEP_col_a
0.767 0.800
ERF8
M01608_2.00
Arabidopsis thaliana
MGCCGNMNNN

NNNKNCGGCK
PBM
Weirauch et al.(2014)
pTH8095
0.749 0.740
ERF8
M06586_2.00
Arabidopsis thaliana
NYHDYCKCCGCCGYH

DRCGGCGGMGRHDRN
Dap-seq
OMalley et al.(2016)
ERF8_col_a
0.749 0.740
ERF8
M06587_2.00
Arabidopsis thaliana
HNNHDSCGCCGYCRHHDN

NHDDYGRCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
ERF8_colamp_a
0.749 0.740
ERF086
M06663_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYHD

HDRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
PUCHI_col_a
0.732 0.740
ERF086
M06664_2.00
Arabidopsis thaliana
NNNNHDHCKCCGCCGYHDHHDHNNN

NNNDHDDHDRCGGCGGMGDHDNNNN
Dap-seq
OMalley et al.(2016)
PUCHI_colamp_a
0.732 0.740
Q84J59_MAIZE
M09717_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BD1_01
0.731 0.700
ERF4
M01616_2.00
Arabidopsis thaliana
VCGCCGCC

GGCGGCGB
PBM
Weirauch et al.(2014)
pTH8156
0.722 0.740
ERF4
M06616_2.00
Arabidopsis thaliana
YCDCCGCCGCCRHHD

HDDYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF4_col_a
0.722 0.740
ERF4
M06617_2.00
Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN

NNHDDYGRCGGCGSNDNNDN
Dap-seq
OMalley et al.(2016)
ERF4_colamp_a
0.722 0.740
ERF9
M06670_2.00
Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN

NDRHDRHDDHGRCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF9_col_a
0.710 0.700
ERF9
M06671_2.00
Arabidopsis thaliana
NNHDSCGCCGYCRHWDN

NHWDYGRCGGCGSHDNN
Dap-seq
OMalley et al.(2016)
ERF9_colamp_a
0.710 0.700
ERF4_TOBAC
M09728_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_02
0.710 0.720
ERF096
M01630_2.00
Arabidopsis thaliana
NVGCCGNCNN

NNGNCGGCBN
PBM
Weirauch et al.(2014)
pTH7909
0.710 0.740
PK19363.1
M01100_2.00
Cannabis sativa
NMGCCGHMNN

NNKDCGGCKN
PBM
Lambert et al.(2019)
pTH10138
0.706 0.720
PK19363.1
M01643_2.00
Cannabis sativa
CGCCGYCD

HGRCGGCG
PBM
Weirauch et al.(2014)
pTH9609
0.706 0.720
ERF087
M06573_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYYD

HRRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
AT1G28160_col_a
0.703 0.720
ERF087
M06574_2.00
Arabidopsis thaliana
HDYCKCCGCCGYCR

YGRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
AT1G28160_colamp_a
0.703 0.720
ERF10
M06562_2.00
Arabidopsis thaliana
NNHNNHNHHDYCGCCGCCRYN

NRYGGCGGCGRHDDNDNNDNN
Dap-seq
OMalley et al.(2016)
ERF10_col_a
0.687 0.700
ERF10
M06563_2.00
Arabidopsis thaliana
HDSCGCCGCCRHHDNNNNNN

NNNNNNHDDYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF10_colamp_a
0.687 0.700
ERF14
M01045_2.00
Arabidopsis thaliana
NVGCCGNCN

NGNCGGCBN
PBM
Sullivan et al.(2014)
pTH9793
0.685 0.740
HRE1
M06595_2.00
Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN

NDDHDRYGGCGGCGGHKVNDN
Dap-seq
OMalley et al.(2016)
ERF73_col_a
0.681 0.640
HRE1
M06596_2.00
Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY

RYGGCGGCGGHGRNDKHDRND
Dap-seq
OMalley et al.(2016)
ERF73_colamp_a
0.681 0.640
ERF7
M01617_2.00
Arabidopsis thaliana
NGCCGNMNNN

NNNKNCGGCN
PBM
Weirauch et al.(2014)
pTH7606
0.679 0.720
ERF7
M06620_2.00
Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD

HGRCGGCGGHGRHRRNRDNDR
Dap-seq
OMalley et al.(2016)
ERF7_col_a
0.679 0.720
ERF7
M06621_2.00
Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH

DYGGCGGCGSHDDNDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF7_colamp_a
0.679 0.720
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA02G0193000.1 AP2 57 108

Links

Other AP2 family TFs
Other Oryza glaberrima TFs

734 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NAC047 Arabidopsis thaliana AT3G04070 D 0.000
Carubv10014000m.g Capsella rubella Carubv10014000m.g I 0.000
Ciclev10020717m.g Citrus clementina Ciclev10020717m.g I 0.000
Eucgr.A02070 Eucalyptus grandis Eucgr.A02070 I 0.000
Gorai.007G267900 Gossypium raimondii Gorai.007G267900 I 0.000
Gorai.013G191800 Gossypium raimondii Gorai.013G191800 I 0.000
Lus10003269.g Linum usitatissimum Lus10003269.g I 0.000
Lus10006547.g Linum usitatissimum Lus10006547.g I 0.000
Lus10042531.g Linum usitatissimum Lus10042531.g I 0.000
orange1.1g017665m.g Citrus sinensis orange1.1g017665m.g I 0.000
SapurV1A.0867s0160 Salix purpurea SapurV1A.0867s0160 I 0.000
SapurV1A.1058s0080 Salix purpurea SapurV1A.1058s0080 I 0.000
SapurV1A.1196s0040 Salix purpurea SapurV1A.1196s0040 I 0.000
SapurV1A.2115s0010 Salix purpurea SapurV1A.2115s0010 I 0.000
Bostr.2570s0301 Boechera stricta Bostr.2570s0301 I 0.000
cassava35701.valid.m1 Manihot esculenta cassava35701.valid.m1 I 0.000
cassava22631.valid.m1 Manihot esculenta cassava22631.valid.m1 I 0.000
Bo1g152220 Brassica oleracea Bo1g152220 I 0.000
Bo5g148420 Brassica oleracea Bo5g148420 I 0.000
Bra031949 Brassica rapa Bra031949 I 0.000
Bra040152 Brassica rapa Bra040152 I 0.000
anac047 Arabidopsis lyrata fgenesh2_kg.3__367__AT3G04070.1 I 0.000
GLYMA16G04740 Glycine max GLYMA16G04740 I 0.000
GLYMA19G28476 Glycine max GLYMA19G28476 I 0.000
POPTR_0013s05080 Populus trichocarpa POPTR_0013s05080 I 0.000
POPTR_0019s04690 Populus trichocarpa POPTR_0019s04690 I 0.000
TCM_026030 Theobroma cacao TCM_026030 I 0.000
anac047 Vitis vinifera VIT_08s0007g07670 I 0.000
29950.m001173 Ricinus communis 29950.m001173 I 0.000
30078.m002348 Ricinus communis 30078.m002348 I 0.000
Thhalv10021011m.g Eutrema salsugineum Thhalv10021011m.g I 0.000