ORGLA07G0253000 (Oryza glaberrima)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORGLA07G0253000 T003934_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.716 0.882
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.716 0.882
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA07G0253000.1 AP2 49 100

Links

Other AP2 family TFs
Other Oryza glaberrima TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000008443 Ailuropoda melanoleuca ENSAMEG00000008443 N 0.000
ENSNLEG00000010815 Nomascus leucogenys ENSNLEG00000010815 N 0.000
ENSOARG00000015756 Ovis aries ENSOARG00000015756 N 0.000
AHRR Otolemur garnettii ENSOGAG00000010416 N 0.000
ENSONIG00000017966 Oreochromis niloticus ENSONIG00000017966 N 0.000
AHRR Ochotona princeps ENSOPRG00000013408 N 0.000
ahrrb Oryzias latipes ENSORLG00000005309 N 0.000
ENSPANG00000023865 Papio anubis ENSPANG00000023865 N 0.000
ENSPFOG00000012230 Poecilia formosa ENSPFOG00000012230 N 0.000
ENSPSIG00000007107 Pelodiscus sinensis ENSPSIG00000007107 N 0.000
AHRR Pteropus vampyrus ENSPVAG00000007881 N 0.000
ENSTGUG00000008731 Taeniopygia guttata ENSTGUG00000008731 N 0.000
ahrrb Tetraodon nigroviridis ENSTNIG00000008751 N 0.000
ahrr Takifugu rubripes ENSTRUG00000003745 N 0.000
ENSBTAP00000011351-D1 Bos grunniens ENSBTAP00000011351-D1 N 0.000
ENSMMUP00000001012 Macaca fascicularis ENSMMUP00000001012 N 0.000
ENSMPUG00000010246 Mustela putorius furo ENSMPUG00000010246 N 0.000
PDCD6 Macaca mulatta ENSMMUG00000000752 N 0.000
ENSAMXG00000015160 Astyanax mexicanus ENSAMXG00000015160 N 0.000
ENSAPLG00000013653 Anas platyrhynchos ENSAPLG00000013653 N 0.000
AHRR Bos taurus ENSBTAG00000026527 N 0.000
ENSCSAG00000017432 Chlorocebus sabaeus ENSCSAG00000017432 N 0.000
ahrrb Danio rerio ENSDARG00000052618 N 0.000
ENSDORG00000008881 Dipodomys ordii ENSDORG00000008881 N 0.000
AHRR Felis catus ENSFCAG00000015430 N 0.000
AHRR Homo sapiens ENSG00000063438 N 0.000
ahrrb Gasterosteus aculeatus ENSGACG00000001925 N 0.000
AHRR Gallus gallus ENSGALG00000013402 N 0.000
AHRR Gorilla gorilla ENSGGOG00000013694 N 0.000
ENSGMOG00000009114 Gadus morhua ENSGMOG00000009114 N 0.000
ENSLACG00000000606 Latimeria chalumnae ENSLACG00000000606 N 0.000
AHRR Meleagris gallopavo ENSMGAG00000007591 N 0.000
AHRR Myotis lucifugus ENSMLUG00000012589 N 0.000
fgenesh2_pg.scaffold_330000001 Branchiostoma floridae fgenesh2_pg.scaffold_330000001 N 0.000